Gene Avi_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0365 
SymbolrhtB 
ID7387809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp313603 
End bp314220 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID643650035 
ProductRhtB family transporter 
Protein accessionYP_002548250 
Protein GI222147293 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTTG CCAGCCTGCT TGCCTATGCC GGAGCCCTGT TCATTGCCGC CGCCATTCCC 
GGCCCCGGCA TGACGGCGAT CGTGGCGCGG GCGCTTGGCT CCGGTTTTCG CCCGACCTTT
TTCATGGGGC TGGGACTGAT TCTGGGTGAT CTCTGCTATC TGACCGCCGT CATTCTGGGC
CTTGCCTATA TTGCCCAGAC CTTCGTGACG CCGTTCCTGA TCATCAAATT CGCAGGCACG
CTCTACCTGG CTTATATCGC CTGGAAGCTC TGGACGGCAG GGCTTTTGCC GCAAAATATC
GAAGCGCGCA AAAGTGTGGG CGTGATGGCA TCCTTCCTGT CCGGCCTGTT CGTGACGCTC
GGCAACCCGA AGACCATGCT GTTCTACGTC GCCCTGGTGC CGACCCTCAT TCCGCTCGAG
GCCATTGGCC CGGCGGATTA CGGGCTATTG GTCGGCACGA CATTCGTGGT GCTGATGGCC
GTGCTCATTC CCTATATTCT TATGGCTGCC AAGGCGCGGC TGCTGCTGAA GCAGCCCTCC
GCGTTGAAAC TGCTCAACCG GGCCGCCGCC AGCATTCTGG CCGGAACCGC CGCCTATATC
GCCACAAAGG CGGCGTGA
 
Protein sequence
MTLASLLAYA GALFIAAAIP GPGMTAIVAR ALGSGFRPTF FMGLGLILGD LCYLTAVILG 
LAYIAQTFVT PFLIIKFAGT LYLAYIAWKL WTAGLLPQNI EARKSVGVMA SFLSGLFVTL
GNPKTMLFYV ALVPTLIPLE AIGPADYGLL VGTTFVVLMA VLIPYILMAA KARLLLKQPS
ALKLLNRAAA SILAGTAAYI ATKAA