Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0351 |
Symbol | dnaN |
ID | 7387798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 301462 |
End bp | 302700 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643650024 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_002548239 |
Protein GI | 222147282 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.203557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATTTTG ATCGTCTTTG CTGCCATTTT GCCCGTCCGA ATAAAGCCGG GCATCGTCGC CCGGATCAAG GCAAGCCGAT CCCGAATGCC GGATCGCACA GGTCGAAAGT GGCAGCGTCG ATGCGTATTA CTCTTGAACG GTCCAATCTT CTGAAGTCCC TGAACCATGT TCATCGGGTG GTCGAGCGGC GCAATACCAT TCCGATCCTG TCCAACGTGC TGCTGCGCGC CGAAGGCCAG AGCCTGTCAA TGAAGGCAAC CGACCTCGAT CTGGAAGTCA CCGAAGCGAC CCCGGCCAAT ATCGAGCAGG CCGGTGCGAC CACGGTTCCA GCCCATCTTC TGTATGAAAT CGTCCGCAAG CTGTCTGACG GCGCTGAGGT GCTGCTCTCG ACCAATCCGG ATGGTGCCAG CATGACGGTC GCCTCGGGTC GGTCGAAATT CTCGTTGCAA TGCCTGCCGG AGCAGGATTT CCCTGATCTG ACCACTGGCA GCTTCAGCCA TTCCTTCAAG TTGAAGGCCT CGGACCTGAA AATGCTGATC GATCGCACCC AATTTGCGAT CTCGACGGAA GAAACCCGTT ATTACCTGAA CGGCATTTAC CTCCATACCA TTGAAGCCGA TGGCAAGTTG AAGCTGCGCG CCGTCGCCAC CGATGGCCAC CGCCTGGCCC GCGCCGACGT GGAAGCGCCG TCCGGTTCGG AAGGCATGCC TGGTATCATC ATTCCGCGCA AGACGGTTGG CGAGTTGCAG AAACTGGTCG ATAATCCCGA TCTGATCGTG GCGCTCGAAG TGTCCGACGC CAAGATCCGC TTCAATATTG GCGAGATCGT CATGACCTCG AAGCTGATCG ACGGCACCTT CCCGGATTAT CAGCGCGTCA TTCCCCAGGC CAATGACAAG GAAATGCGGG TGGATTGCCA GACATTCGCC CGCGCAGTTG ACCGTGTTTC CACCATTTCG TCGGAACGTG GCCGGGCGGT GAAGCTCGCC ATCGGCGACG GCCATCTGAT GCTGACGGTC AACAACCCGG ATTCGGGCAG CGCCACCGAG GAAGTCGCCG TCGGCTACGA AAGCGACGCG ATGGAAATCG GCTTCAACGC CAAATATCTG CTCGACATCA CCGCTCAGCT GTCCGGCGAA GAAGCGATTT TCCTTCTGGC CGATGCCGGA TCGCCGACCT TGATCCGCGA TACGGCTGGC GACGATGCGC TTTACGTGCT GATGCCAATG CGCGTTTAG
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Protein sequence | MHFDRLCCHF ARPNKAGHRR PDQGKPIPNA GSHRSKVAAS MRITLERSNL LKSLNHVHRV VERRNTIPIL SNVLLRAEGQ SLSMKATDLD LEVTEATPAN IEQAGATTVP AHLLYEIVRK LSDGAEVLLS TNPDGASMTV ASGRSKFSLQ CLPEQDFPDL TTGSFSHSFK LKASDLKMLI DRTQFAISTE ETRYYLNGIY LHTIEADGKL KLRAVATDGH RLARADVEAP SGSEGMPGII IPRKTVGELQ KLVDNPDLIV ALEVSDAKIR FNIGEIVMTS KLIDGTFPDY QRVIPQANDK EMRVDCQTFA RAVDRVSTIS SERGRAVKLA IGDGHLMLTV NNPDSGSATE EVAVGYESDA MEIGFNAKYL LDITAQLSGE EAIFLLADAG SPTLIRDTAG DDALYVLMPM RV
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