Gene Avi_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0351 
SymboldnaN 
ID7387798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp301462 
End bp302700 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content58% 
IMG OID643650024 
ProductDNA polymerase III subunit beta 
Protein accessionYP_002548239 
Protein GI222147282 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.203557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATTTTG ATCGTCTTTG CTGCCATTTT GCCCGTCCGA ATAAAGCCGG GCATCGTCGC 
CCGGATCAAG GCAAGCCGAT CCCGAATGCC GGATCGCACA GGTCGAAAGT GGCAGCGTCG
ATGCGTATTA CTCTTGAACG GTCCAATCTT CTGAAGTCCC TGAACCATGT TCATCGGGTG
GTCGAGCGGC GCAATACCAT TCCGATCCTG TCCAACGTGC TGCTGCGCGC CGAAGGCCAG
AGCCTGTCAA TGAAGGCAAC CGACCTCGAT CTGGAAGTCA CCGAAGCGAC CCCGGCCAAT
ATCGAGCAGG CCGGTGCGAC CACGGTTCCA GCCCATCTTC TGTATGAAAT CGTCCGCAAG
CTGTCTGACG GCGCTGAGGT GCTGCTCTCG ACCAATCCGG ATGGTGCCAG CATGACGGTC
GCCTCGGGTC GGTCGAAATT CTCGTTGCAA TGCCTGCCGG AGCAGGATTT CCCTGATCTG
ACCACTGGCA GCTTCAGCCA TTCCTTCAAG TTGAAGGCCT CGGACCTGAA AATGCTGATC
GATCGCACCC AATTTGCGAT CTCGACGGAA GAAACCCGTT ATTACCTGAA CGGCATTTAC
CTCCATACCA TTGAAGCCGA TGGCAAGTTG AAGCTGCGCG CCGTCGCCAC CGATGGCCAC
CGCCTGGCCC GCGCCGACGT GGAAGCGCCG TCCGGTTCGG AAGGCATGCC TGGTATCATC
ATTCCGCGCA AGACGGTTGG CGAGTTGCAG AAACTGGTCG ATAATCCCGA TCTGATCGTG
GCGCTCGAAG TGTCCGACGC CAAGATCCGC TTCAATATTG GCGAGATCGT CATGACCTCG
AAGCTGATCG ACGGCACCTT CCCGGATTAT CAGCGCGTCA TTCCCCAGGC CAATGACAAG
GAAATGCGGG TGGATTGCCA GACATTCGCC CGCGCAGTTG ACCGTGTTTC CACCATTTCG
TCGGAACGTG GCCGGGCGGT GAAGCTCGCC ATCGGCGACG GCCATCTGAT GCTGACGGTC
AACAACCCGG ATTCGGGCAG CGCCACCGAG GAAGTCGCCG TCGGCTACGA AAGCGACGCG
ATGGAAATCG GCTTCAACGC CAAATATCTG CTCGACATCA CCGCTCAGCT GTCCGGCGAA
GAAGCGATTT TCCTTCTGGC CGATGCCGGA TCGCCGACCT TGATCCGCGA TACGGCTGGC
GACGATGCGC TTTACGTGCT GATGCCAATG CGCGTTTAG
 
Protein sequence
MHFDRLCCHF ARPNKAGHRR PDQGKPIPNA GSHRSKVAAS MRITLERSNL LKSLNHVHRV 
VERRNTIPIL SNVLLRAEGQ SLSMKATDLD LEVTEATPAN IEQAGATTVP AHLLYEIVRK
LSDGAEVLLS TNPDGASMTV ASGRSKFSLQ CLPEQDFPDL TTGSFSHSFK LKASDLKMLI
DRTQFAISTE ETRYYLNGIY LHTIEADGKL KLRAVATDGH RLARADVEAP SGSEGMPGII
IPRKTVGELQ KLVDNPDLIV ALEVSDAKIR FNIGEIVMTS KLIDGTFPDY QRVIPQANDK
EMRVDCQTFA RAVDRVSTIS SERGRAVKLA IGDGHLMLTV NNPDSGSATE EVAVGYESDA
MEIGFNAKYL LDITAQLSGE EAIFLLADAG SPTLIRDTAG DDALYVLMPM RV