| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0345 |
|---|
| Symbol | |
|---|
| ID | 7387793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 297616 |
|---|
| End bp | 297906 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643650019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548234 |
|---|
| Protein GI | 222147277 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5470] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0272597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG GATATTGGAT CGCGCGCGTC GATGTGCGTG ATGCGGAACG CTACAAGGAT
TACGTCTCGA CGGCAAAGCC GGCCTTTGAG CGTTTCGGCG CGGTCTTTCT GGCCCGTGGC
GGCAAGACGG ATGCCGTGGA AGGCCAAAGC CGGGCCCGCA ACGTGGTCAT CGAGTTTCCG
TCCTTTCAGG CCGCTTATGA TTGCTATCAC TCGCCGGAAT ATCAGGCCGC CGTCAAGATC
CGCCAGGAAG TCGCCGACGG CGAGATTGTT CTGGTCGAAG GCAACCTTTG A
|
|---|
| Protein sequence | MAKGYWIARV DVRDAERYKD YVSTAKPAFE RFGAVFLARG GKTDAVEGQS RARNVVIEFP
SFQAAYDCYH SPEYQAAVKI RQEVADGEIV LVEGNL
|
|---|
| |