Gene Avi_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0303 
Symbol 
ID7387759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp258465 
End bp258923 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID643649985 
Producthypothetical protein 
Protein accessionYP_002548200 
Protein GI222147243 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTA CATCCGTTCA AGATTTCTTT TCGGCCCACG CGCCGGATAT CACCGTGATT 
GAAACCGAGC AAAGCTCGGC CACCGTGCCT TTGGCCGCCC TGGCGCATGG TGTCGAGCCG
GACCAGATCG CCAAGACCCT TTGTTTGCGG GTTGGGGACG TCATCATGCT GGTGGTTGCC
GCAGGCGAGC GAAGGCTAGA CAACAAGAAA TTCAAGGAGC GGTTCGGGGG CAAGCCCCGT
ATGCTGGGAG CGGAAGAGGT CGTGGCGCTG ACCGGCCATC CAGTGGGTGG CGTTTGTCCT
TTCGGGCTGG CCACCCCGCT TCCTGTGTTT TGCGATACGT CGTTGCAGCG TTTCGACATT
GTTGTCCCTG CCGCCGGAGC CACCAATTCC GCCGTCAAGA TTGCGCCGCA ACGCATAGTC
GATCTGACCG GGGCGGAATG GGTCGATGTC TGCCAATAA
 
Protein sequence
MSLTSVQDFF SAHAPDITVI ETEQSSATVP LAALAHGVEP DQIAKTLCLR VGDVIMLVVA 
AGERRLDNKK FKERFGGKPR MLGAEEVVAL TGHPVGGVCP FGLATPLPVF CDTSLQRFDI
VVPAAGATNS AVKIAPQRIV DLTGAEWVDV CQ