Gene Avi_0287 details

Gene Information

• Locus tag: Avi_0287
• Symbol: phnM
• ID: 7387583
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 243278
• End bp: 244429
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643649973
• Product: phosphonate metabolism protein PhnM
• Protein accession: YP_002548188
• Protein GI: 222147231
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism
• TIGRFAM ID: [TIGR02318] phosphonate metabolism protein PhnM

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAATG AAACCGTGCT GTCCAATGCG ACTGTGGTGC TGGAAAGTGG GCTGCTTCTG 
AAGGGGGCTG TGGTCATTCG TGATGGCCTG ATTGCTGAAA TTTCAGAAGG CAACAGCCGC 
ATCGGCGAGG ATTTCGGCGG CGATTATCTG ATCCCCGGGC TGGTCGAGCT GCATACCGAT 
CATCTGGAAT CGCATTATTC GCCACGCCCC GGTGTGCGCT GGAACAAGAC CGCAGCCATT 
CAGGCCCATG ATGCCCAGGT CGTCACCTCA GGCATTACCA CCGTGTTCGA TTGCCTGCGG 
ATGGGGTCGG ACGAGGATGG CGGGTTTGAG AAGGGTGAAA TGCGCGATAT GGCCGACGCC 
ATCCAGGCCG CCGAAAAGGA TGACCGTCTC CGCGCCGAGC ACCTGCTGCA TCTGCGCTGT 
GAAGTCGCAT CCGACAATGT TCTCGACCAT TTCGCCGATT TCGAGCAGGA CCCGCATGTG 
CGGCTGGTGT CGCTGATGGA CCACTCCCCG GGCCAGCGGC AGTTCCAGAC CATGGACCAG 
TATACGCTCT ATTATAAGAC CAAGAAGGGC TTGAGCGAGG AAGCCTTCGC TCGTTTCGTT 
GAAAAGCGTT TAGAGGCATC AGCGGCCTAT TCTTCCCAGC ATCGTGATAC GCTGGCCCGC 
CTCTGCGCCG TGCGCGGCAT TACCGTTGCC AGCCATGACG ATGCAACGCT TGCTCATGTG 
GAAGAGGCCA AGGGCCATGG CGTGCGTCTG GCCGAGTTTC CGACCAGTCT TGAGGCCGCC 
GATGCCTCGC ATCAGGCGGG GATGAGCGTG CTGATGGGCG CGCCGAACGT GGTGCGCGGC 
GGCTCCCATT CCGGCAATAT TGCCGCCACG GATCTGGCCG AGCGCGGTGT GCTCGACGTG 
CTGTCTTCCG ATTATATCCC GCTCAGCCTG CTGCACGCGC CTTTCGTGCT CGCCCATCGC 
TATGAGGCGA TCAGCCTGCC GCAGGCATTG GCCATGGTGA CATCGACGCC TGCCCGCACC 
GTCGGGCTGG AAGACCGGGG CCGGATTGCC CCTGGCCTGC GCGCCGATCT GGTGCGGGTG 
CGCTACAGCG AAAATCACGG TGGCGTGCCG GTGGTGCGCT CCGTCTGGCG CCAGGGTAGA 
AGGGTGGCAT AA 

 

Protein sequence

MSNETVLSNA TVVLESGLLL KGAVVIRDGL IAEISEGNSR IGEDFGGDYL IPGLVELHTD 
HLESHYSPRP GVRWNKTAAI QAHDAQVVTS GITTVFDCLR MGSDEDGGFE KGEMRDMADA 
IQAAEKDDRL RAEHLLHLRC EVASDNVLDH FADFEQDPHV RLVSLMDHSP GQRQFQTMDQ 
YTLYYKTKKG LSEEAFARFV EKRLEASAAY SSQHRDTLAR LCAVRGITVA SHDDATLAHV 
EEAKGHGVRL AEFPTSLEAA DASHQAGMSV LMGAPNVVRG GSHSGNIAAT DLAERGVLDV 
LSSDYIPLSL LHAPFVLAHR YEAISLPQAL AMVTSTPART VGLEDRGRIA PGLRADLVRV 
RYSENHGGVP VVRSVWRQGR RVA