| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0273 |
|---|
| Symbol | phnJ |
|---|
| ID | 7387574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | + |
|---|
| Start bp | 234774 |
|---|
| End bp | 235682 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643649964 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002548179 |
|---|
| Protein GI | 222147222 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3627] Uncharacterized enzyme of phosphonate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTACGG AAGTTTCATT AGCGGACGAA ATTGCCACTT ATAATTTTGC CTATCTGGAT
GAGCAGACCA AGCGGATGAT CCGCCGGGCG ATCCTGAAGG CCATCGCCAT CCCCGGCTAT
CAGGTGCCGT TTGCCTCGCG TGAAATGCCA ATGCCCTATG GCTGGGGCAC TGGCGGCGTA
CAGGTGACGG CGGCGATCCT TGGGCCGGAC GATGTGCTGA AGGTGATCGA CCAGGGTGCC
GACGACACCA CCAATGCCGT GTCGATCCGG GCCTTCTTTC AGAAGGTCGC CAATGTGGCA
GTCACCACCC ATACGGGCGA CGCTACCATC ATCCAGACCC GCCACCGGAT TCCGGAGGAA
AAGCTGCGGG CGGGCCAGGT GCTGGTCTAT CAGGTGCCGA TCCCGGAGCC TTTGCGCTTC
CTGGAGCCGC GCGAGACCGA GACCCGCAAG ATGCATGCAT TGGAAGAATA TGGCCTGATG
CATGTGAAGC TCTATGAAGA CATCGCCCGC AATGGCCGGA TCGCCACCAC CTATGCCTAT
CCGGTCAAAG TGGCGGGTCG CTATGTAATG GACCCGTCTC CGACACCGAA ATTCGACAAT
CCGAAAATGC ACCGGTCAGA GGCCCTGCAA TTGTTTGGCG CGGGCCGCGA AAAGCGGATC
TATGCCGTGC CGCCCTATAC CGATGTCGTC AGCCTGGATT TCGAGGATCA TCCTTTCACG
GTGCAAAGCT TCGACAAGCC CTGTGCGCTC TGCGGTGCCG AGCATGTCTA TCTCGATGAA
GTGATCCTCG ACGACAAGGG CGGGCGAATG TTCGTCTGCT CCGACACTGA CCATTGCGAG
GATCGCCGCG CCAAAGGTCA TCGGGGTGAG ATGCTGGCGG AAACACAGCA GGGGGAGGCC
GCCCAATGA
|
|---|
| Protein sequence | MITEVSLADE IATYNFAYLD EQTKRMIRRA ILKAIAIPGY QVPFASREMP MPYGWGTGGV
QVTAAILGPD DVLKVIDQGA DDTTNAVSIR AFFQKVANVA VTTHTGDATI IQTRHRIPEE
KLRAGQVLVY QVPIPEPLRF LEPRETETRK MHALEEYGLM HVKLYEDIAR NGRIATTYAY
PVKVAGRYVM DPSPTPKFDN PKMHRSEALQ LFGAGREKRI YAVPPYTDVV SLDFEDHPFT
VQSFDKPCAL CGAEHVYLDE VILDDKGGRM FVCSDTDHCE DRRAKGHRGE MLAETQQGEA
AQ
|
|---|
| |