| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0250 |
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| Symbol | pncB |
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| ID | 7387559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 220183 |
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| End bp | 221487 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649948 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_002548164 |
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| Protein GI | 222147207 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.221329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGG CGGATATTGC GAGGCGGGTG TATAACCATG CCTGGAAGCT TGACCCCATC
GTGCGCAGTC TGCTCGATAC TGATTTCTAT AAGCTGCTGA TGTTGCAGAT GATCTGGAAG
CTCTATCCAG ATGTCGATGT GACGTTTACG CTGATTAACC GCACGACAAG CGTGCGGATT
GCCGACGAGA TCGACGAGGC CGAACTGCGC GCCCAGCTTG ATCACGTCCG CACGCTTGGA
ATCAGCAAGA AAGAGTTGAT TTGGCTGGCA GGCAATAGCT TTTATGGCCG CACCCAGATT
TTCGAGCCGG AATTTCTGGC CTGGCTCTCA GCAATCCGCC TGCCAGCCTA TGAGCTTTCC
AAGCGGGACG GCCAATATGA GCTGACCTTC CGGGGGCGAT GGATGGAAAC CACGCTGTGG
GAAATCCCGG CTCTCGCAAT CATCAATGAA TTGCGGTCGC GGGCTGCGCT GAAATCGCTC
GGTTATTTTA CGCTTGACGT TATCTATGCC CGTGCCAAGG CAAAGATGTG GGAAAAAGTC
GAGCGGCTGA AGCAATTGCC AGGCCTGCGG ATTTCCGATT TCGGCACCCG TCGTCGCCAC
AGTTTTCTGT GGCAAAGATG GTGTGTGGAA GCCCTGAAGG AAGGCATTGG CGAAGCCTTT
ACCGGCACCA GCAATGTATT GCTGGCTATG GATTCGGATC TGGAAGCCGT CGGCACCAAT
GCCCATGAAT TGCCGATGGT GGCCGCGGCC CTAGCAAAGA CTGATGCCGA ACTGGCCAAT
GCGCCCTATA AAGTGCTTCA GGACTGGAAT ACGCTCTACA ACGGCAATTT GCTGATCGTT
TTGCCCGATG CCTTCGGCAC CTCGGCTTTC CTGCGCGATG CGCCGCCCTG GGTGGCGGAT
TGGACTGGTT TTCGTCCTGA TAGTGCCCCG CCGATTGAGG GCGGTGAGAG AATCATCGCC
TGGTGGGAAA AGATGGGTCG CGATCCGCGC CAGAAACTGC TGATCTTTTC CGACGGGCTG
GATGTGGACG CCATCATCGA CACGTACCGT CATTTTGAAG GCCGGGTGCG AATGAGCTTT
GGCTGGGGCA CCAACCTCAC CAATGATTTC ATCGGCTGCG CACCCCATGA CATTGCCGGG
CTGAAGCCGA TTTCTATCGT CTGCAAGATC ACCGAAGCCA ATGGCCGTCC CGCCGTCAAG
CTCTCCGACA ATCCCTTGAA GGCCACGGGA GAACCCGCCG AAGTCGAACG CTACCTGAAA
TTCTTCGGGT CCGAGGACCG TGTGGAACAC GCCGTCAAGG TATAA
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| Protein sequence | MAKADIARRV YNHAWKLDPI VRSLLDTDFY KLLMLQMIWK LYPDVDVTFT LINRTTSVRI
ADEIDEAELR AQLDHVRTLG ISKKELIWLA GNSFYGRTQI FEPEFLAWLS AIRLPAYELS
KRDGQYELTF RGRWMETTLW EIPALAIINE LRSRAALKSL GYFTLDVIYA RAKAKMWEKV
ERLKQLPGLR ISDFGTRRRH SFLWQRWCVE ALKEGIGEAF TGTSNVLLAM DSDLEAVGTN
AHELPMVAAA LAKTDAELAN APYKVLQDWN TLYNGNLLIV LPDAFGTSAF LRDAPPWVAD
WTGFRPDSAP PIEGGERIIA WWEKMGRDPR QKLLIFSDGL DVDAIIDTYR HFEGRVRMSF
GWGTNLTNDF IGCAPHDIAG LKPISIVCKI TEANGRPAVK LSDNPLKATG EPAEVERYLK
FFGSEDRVEH AVKV
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