Gene Avi_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0235 
Symbol 
ID7387547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp206429 
End bp207064 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID643649936 
Productphosphoglyceromutase 
Protein accessionYP_002548152 
Protein GI222147195 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0588] Phosphoglycerate mutase 1 
TIGRFAM ID[TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGTA CCCTCGTGCT CGTGCGCCAT GGCCAGAGCG ATTGGAATTT GAAGAACCTG 
TTCACCGGTT GGCGTGATCC CGACCTGACC GACCTTGGCG TGCAGGAAGC CAATGCTGGC
GGCAAGGCGC TGAAGGACTA TGGTATCCAG TTCGATATCG CCTTTACCTC CGATCTTTCC
CGCGCCCAGA AGACCTGCGG TATCATTCTC GACAATCTTG GCCAGTCCGG CCTTGAAACC
ATCCGCGATC AGGCCCTGAA CGAGCGTGAT TACGGCGATC TTTCCGGCCT CAACAAGGAC
GACGCCCGCG CCAAATGGGG CGAGGAACAG GTGCATATCT GGCGCCGTTC CTACGACATT
CCGCCACCGG GCGGCGAAAG CCTGCGCGAT ACCGGCGCCC GCGTCTGGCC CTATTACCTC
ACCGAAATCC TGCCGCGCGT GCTGCGGGGC GAAAAGGTGC TGGTGGCGGC CCATGGGAAT
TCGCTGCGCT CGCTGGTAAT GGTGCTGGAC AAGCTGACCA AGGAACAGAT CCTCAGCGTC
AATCTCGCCA CCGGCGTGCC GATGGTCTAC AAGCTGAACG CCGATTCCAC CGTGGCTTCC
AAGGACGTGC TGGGCGACAT GTCCGGCGCT CACTAG
 
Protein sequence
MTGTLVLVRH GQSDWNLKNL FTGWRDPDLT DLGVQEANAG GKALKDYGIQ FDIAFTSDLS 
RAQKTCGIIL DNLGQSGLET IRDQALNERD YGDLSGLNKD DARAKWGEEQ VHIWRRSYDI
PPPGGESLRD TGARVWPYYL TEILPRVLRG EKVLVAAHGN SLRSLVMVLD KLTKEQILSV
NLATGVPMVY KLNADSTVAS KDVLGDMSGA H