| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0214 |
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| Symbol | ctpG |
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| ID | 7387531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 192236 |
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| End bp | 193714 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643649920 |
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| Product | component of type IV pilus |
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| Protein accession | YP_002548136 |
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| Protein GI | 222147179 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGTA AACGTGGAAA TGAAGGGTCT GTAAAGTCCG GTTCCGGCAC AGCGGTGCCG
GTCTCGGCAC TGTCATCGCC CGGCATGCCG GCGTCCGTTT CTTCATCCGG ACGGATCGAA
CCGGGCCGCG CCGAGCCACC CAGGCCAGCC GCTCCCGCCG ATCCGGCTCA GCGTCGTCGC
CAGAACCGGA CCGAGGATTA TTACGATACC AAGAGCCAGG TTTTTTCGGC GCTGATCGAC
ACGATCGACC TGTCGCAGCT TGCCAAGCTG GACGCGGAAA GCGCGCGCGA GGAAATCCGC
GATATCGTCA ACGATATCAT TTCCATCAAG AATTTCGCCA TGTCGATTTC CGAGCAGGAA
GAACTGCTCG ACGACATCTG CAATGACGTG CTGGGCTACG GCCCCTTGGA ACCCTTGCTG
GCCCGCGACG ATATTTCCGA CATCATGGTC AACGGTGCCG GCCAGACCTT TATCGAAGTC
GGCGGCAAAA CCATCGAATC CGAAATCCGG TTTCGCGACA ATTCCCAGCT TCTCTCAATA
TGCCAGCGCA TCGTCAGCCA GGTTGGCCGC CGCGTCGATG AGAGCAGCCC GATCTGCGAC
GCCCGCCTGC CGGACGGATC GCGCGTCAAT GTGATCGCTC CGCCGCTGTC CATCGATGGT
CCGGCGCTGA CGATCCGTAA ATTCAAGAAG GACAAGCTCA ATCTCGACCA ATTGGTCAAG
TTTGGCGCCA TTACGCCGGA AGGCGCGCAA GTCCTGCAAA TCATCGGGCG AGTGCGCTGT
AATGTGGTGA TTTCCGGCGG CACTGGCTCA GGCAAAACCA CCCTGCTCAA TTGTCTGACA
CGCTATATCG ACGCCGACGA ACGGGTGATT ACCTGCGAAG ATACGGCAGA ATTGCAATTG
CAGCAGCCGC ATGTCGTGCG TCTTGAAACC CGCCCGCCGA ATATCGAGGG CGAAGGCGAA
ATCACCATGC GTGATCTTGT CAAGAACTGC CTGCGTATGC GCCCGGAACG GATCATCGTC
GGCGAAGTGC GCGGATCGGA AGTCTTCGAC CTGTTGCAGG CGATGAATAC CGGCCATGAC
GGCTCGATGG GCACCATCCA CGCCAATACG CCGCGCGAAT GCCTGAGCCG CATGGAATCG
ATGATTGCCA TGGGCGGCTA TTCGCTTCCG GCAAAGACTG TCCGCGAGAT TATTTCGGGC
TCGATCGACA TTATTATACA GGCAGCTCGC CTGCGCGACG GCACACGCCG CATCACCCAC
ATTACCGAAG TCGTGGGGAT GGAAGGCGAT GTGATCATCA CCCAGGACCT GATGCGCTTC
GAAATGGATG GCGAGGACCT GACCGGCAAG ATCATCGGTC GTCATATCTC CACCGGCATC
GGCAAGCCGC ATTTCTGGGA ACGCGCCCGC TATTACAACG AGGAACGGCG CCTGGCGGCG
GCGCTCGACG CCATGGAACA GAAAACCGGT GTAGTATAA
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| Protein sequence | MFGKRGNEGS VKSGSGTAVP VSALSSPGMP ASVSSSGRIE PGRAEPPRPA APADPAQRRR
QNRTEDYYDT KSQVFSALID TIDLSQLAKL DAESAREEIR DIVNDIISIK NFAMSISEQE
ELLDDICNDV LGYGPLEPLL ARDDISDIMV NGAGQTFIEV GGKTIESEIR FRDNSQLLSI
CQRIVSQVGR RVDESSPICD ARLPDGSRVN VIAPPLSIDG PALTIRKFKK DKLNLDQLVK
FGAITPEGAQ VLQIIGRVRC NVVISGGTGS GKTTLLNCLT RYIDADERVI TCEDTAELQL
QQPHVVRLET RPPNIEGEGE ITMRDLVKNC LRMRPERIIV GEVRGSEVFD LLQAMNTGHD
GSMGTIHANT PRECLSRMES MIAMGGYSLP AKTVREIISG SIDIIIQAAR LRDGTRRITH
ITEVVGMEGD VIITQDLMRF EMDGEDLTGK IIGRHISTGI GKPHFWERAR YYNEERRLAA
ALDAMEQKTG VV
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