Gene Avi_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0200 
SymbolinfC 
ID7387520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp179359 
End bp179814 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content54% 
IMG OID643649908 
Producttranslation initiation factor IF-3 
Protein accessionYP_002548125 
Protein GI222147168 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGACG CAGAAGGCCA GAATCTCGGC GCCGTGCCGA CGGACCAGGC GCTCCGCATG 
GCGGAAGAAG CCGGTCTCGA TCTGGTCGAA ATTTCGCCGA ATGCTGAACC GCCCGTTTGC
AAGATCCTGG ACCTTGGCAA GCTGAAATAC GCCAACCAGA AGAAGGCGGC AGAAGCGCGC
AAGAAACAGA AAATCGTTGA AGTCAAAGAA ATCAAGATGC GCCCGAACAT CGACACCCAT
GACTATGAGG TGAAGATGAA GTCGATGTCG CGGTTCTTTG AAGACGGCGA TAAGGTCAAG
GTCACCCTGA AGTTCCGTGG CCGCGAAATG GCCCACCAGG AACTGGGCAT GAAATTGCTC
ATGCAGGTGA AGGAAGACAC AGTCGAAGTT GCCAAGGTTG AAGCTGAACC CAAGCTCGAA
GGTCGTCAGA TGATGATGGT GCTGGCCCCT AAATAA
 
Protein sequence
MIDAEGQNLG AVPTDQALRM AEEAGLDLVE ISPNAEPPVC KILDLGKLKY ANQKKAAEAR 
KKQKIVEVKE IKMRPNIDTH DYEVKMKSMS RFFEDGDKVK VTLKFRGREM AHQELGMKLL
MQVKEDTVEV AKVEAEPKLE GRQMMMVLAP K