Gene Avi_0193 details

Gene Information

• Locus tag: Avi_0193
• Symbol: cmk
• ID: 7387515
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 173741
• End bp: 174394
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643649903
• Product: cytidylate kinase
• Protein accession: YP_002548120
• Protein GI: 222147163
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0283] Cytidylate kinase
• TIGRFAM ID: [TIGR00017] cytidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACTGAGG TGACGGAAAA CACGTTTGTA ATCGCCATCG ATGGTCCTGC GGCTGCGGGC 
AAGGGAACGC TGTCACGCCG GATCGCCGAC AGTTACGGCT TTCATCATCT GGACACGGGC 
CTGACCTACC GCGCCACAGC CAAGGCGCTT TTGGAAAAAA GCCTGCCGCT CGATAATGAG 
GCTGTGGCCG AGCAGGTGGC GCTGGGGCTC GATCTTTCCG GTCTGGACCG GGAGGTTCTG 
GCCAAGCACG ATATCGGTGA GGCGGCGTCG AAAATCGCCG TCATGCCCGC GGTGCGTCGC 
GCTCTGGTCG AGGCGCAGCG ACGGTTTTCG CTGAAAGCCC CCGGTGCGGT CCTGGACGGG 
CGCGATATCG GCACGGTTGT CTGCCCGGAT GCGGCGGTTA AGCTCTATGT CACGGCCTCT 
CCGGAGGTGC GCGCCCGGCG TCGCTTTGAC GAGATTGTCG CCCATGGTGG CGTGGCTGAT 
TATCCCGCAG TTTTTGAGGA TGTGAAGCGG CGCGACGACC GCGACATGGG CCGCGCCGAC 
AGTCCGTTGA AACCTGCTGA AGACGCGCAC TTGCTAGATA CGTCCGAAAT GAGTATAGAG 
GCGGCGTTTC AGGCCGCGCG TTCCTTGATC GATGCGGCAT TGAAAAACAA TTAG 

 

Protein sequence

MTEVTENTFV IAIDGPAAAG KGTLSRRIAD SYGFHHLDTG LTYRATAKAL LEKSLPLDNE 
AVAEQVALGL DLSGLDREVL AKHDIGEAAS KIAVMPAVRR ALVEAQRRFS LKAPGAVLDG 
RDIGTVVCPD AAVKLYVTAS PEVRARRRFD EIVAHGGVAD YPAVFEDVKR RDDRDMGRAD 
SPLKPAEDAH LLDTSEMSIE AAFQAARSLI DAALKNN