| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0190 |
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| Symbol | |
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| ID | 7387513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 171038 |
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| End bp | 172417 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643649900 |
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| Product | ABC transporter membrane spanning protein (sugar) |
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| Protein accession | YP_002548118 |
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| Protein GI | 222147161 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTTG ATCGTGAAAA GGCACACAGA CAATCTCGTG TCGCCACTGC CAGCGGCTGG
ATTGGCTCCG CGCTGGAATA TTATGATTTC TTCATTTACG CCACAGCTGC GGCACTGGTT
TTTCCTCAGC TGTTTTTTCC ATCTGTAGAT CCGACGACAG CGATTGTCGC ATCATTGACA
ACCTACGGCG TGGGCTATGT CAGCCGCCCA ATCGGTGCGT TTGTTCTGGG GCATATGGGC
GACGTTTACG GTCGCAAGAA AATGATGCTG ACCTGCCTGT TTCTCATGGG CTTTTCGACA
CTGATGGTCG GCCTGTTGCC CACGTATGCG CAAATCGGCA TCTGGGCTCC GATTTTTCTG
GTCGTGCTTC GCCTGATCCA GGGTTTTGCT GTCGCCGGTG AAATTTCAGG TGCGTCGTCA
ATGATTCTGG AACATGCACC AACCGGCCGA CGGGGCTTTT TCGCCTCCTT CGCACTTCAG
GGCGTCCAGG CCGGACAAAT TTTGGCTGCC GCCGTGTTTT TGCCGCTCGC CCACTATATG
GAGCCTGCGG CATTCAACAG CTGGGGCTGG CGTATTCCCT TTCTGCTGTC GATCTTCGTG
GTAATCGTCG GCTTTGTCAT CCGCCGTCTG GTTGAGGAAA CACCAACCTT CGTCAACGCC
AGCGAAAGTG GCGCGGTCTC GAAAGCGCCC ATCGTCGAGG CCTTCCGTCA TGGTTGGGCC
GATATCATCC GCGTCATGTG CATGTCGCTT ATGAACGTCA TTCCAACCGT GACAACAGTG
TTCGGCGCAG CCTATGCGGT GCAGCCAGCA TACGGTATCG GCTTCAGCAA GGACGTCTAT
CTGTGGATTC CGGTTCTCGG CAATATTGTT GCCGTTCTGG TCATTCCCTT TATCGGCGGA
CTTTCCGACC GTATTGGCCG CAAACCACCG ATCATCATCG GATCATTGCT GTCTGGCGCT
TTGTCGTTTG GCTATCTCTA TGCGATCAGC ATTCACAATG TCCCGATGGC CATAGTGATG
TCGCTGTTGA TGTGGGGCGT GATCTATCAG GGATATAACG CCGTCTTCCC GTCATTCTAT
CCGGAATTGT TCCAGAGCCG CATCCGCGTC TCCTCAATGG CCATCGCGCA GAATGTCGGC
ACGGCAATCA CGGCCCTGTT CCCTGCCCTG TTCACAGCCG TTGCACCGCC CGGCTCGCTG
AATATCCCCA TCGTCATCGG CTGCTGGACG CTGGCCATTA CCGTGATTTC AGCGCTGGCC
GCCCTCTCGG CCCGGGAAAC CTACCGAATC AGTATCAATG AGCTGGGCAA CAAAACGGCA
AAGCCGATCA CCAAGGACGA GTACGATCGT ATGCGTGCGC AATCCATGGC GAAGGCGTAG
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| Protein sequence | MSFDREKAHR QSRVATASGW IGSALEYYDF FIYATAAALV FPQLFFPSVD PTTAIVASLT
TYGVGYVSRP IGAFVLGHMG DVYGRKKMML TCLFLMGFST LMVGLLPTYA QIGIWAPIFL
VVLRLIQGFA VAGEISGASS MILEHAPTGR RGFFASFALQ GVQAGQILAA AVFLPLAHYM
EPAAFNSWGW RIPFLLSIFV VIVGFVIRRL VEETPTFVNA SESGAVSKAP IVEAFRHGWA
DIIRVMCMSL MNVIPTVTTV FGAAYAVQPA YGIGFSKDVY LWIPVLGNIV AVLVIPFIGG
LSDRIGRKPP IIIGSLLSGA LSFGYLYAIS IHNVPMAIVM SLLMWGVIYQ GYNAVFPSFY
PELFQSRIRV SSMAIAQNVG TAITALFPAL FTAVAPPGSL NIPIVIGCWT LAITVISALA
ALSARETYRI SINELGNKTA KPITKDEYDR MRAQSMAKA
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