Gene Avi_0181 details

Gene Information

• Locus tag: Avi_0181
• Symbol: fabA
• ID: 7388340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: -
• Start bp: 168246
• End bp: 168761
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643649896
• Product: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
• Protein accession: YP_002548114
• Protein GI: 222147157
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAAA AACAGACAAG CTATAATTAC GACGAGATTC TCGCCTGCGG TCGGGGTGAA 
CTGTTCGGCC AGGGCAATGC GCAATTGCCG CTGCCGCCCA TGCTGATGTT CAATCGCATC 
ACCGATATTT CGGAAACCGG CGGCCCACAT GACAAGGGCT ATATCCGCGC CGAGTTTGAC 
ATCACCTCCG ATCTCTGGTT CTTCCCCTGC CATTTCCAGG GCGATCCGGT CATGCCGGGA 
TGCCTTGGCC TGGATGCCAT GTGGCAATTG ACCGGCTTTT ACCTCGGCTG GCTGGGCGAA 
CCCGGCAAGG GCCGGGCGAT CTCGACAGGC GAAGTGAAAT TCACCGGCAT GGTTACGCCC 
TCCACCAAGC TGGTGGAATA TGGCATCGAC TTCAAGCGCG TCATGCGCGG GCGTCTGGTG 
CTGGGCATTG CCGACGGCTG GATGAAGGCC GATGGCGAGG TCATCTACAA GGCAACTGAT 
CTGCGTGTCG GGCTTTTCAA GGAAAAGGCC GACTGA 

 

Protein sequence

MNEKQTSYNY DEILACGRGE LFGQGNAQLP LPPMLMFNRI TDISETGGPH DKGYIRAEFD 
ITSDLWFFPC HFQGDPVMPG CLGLDAMWQL TGFYLGWLGE PGKGRAISTG EVKFTGMVTP 
STKLVEYGID FKRVMRGRLV LGIADGWMKA DGEVIYKATD LRVGLFKEKA D