| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0163 |
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| Symbol | |
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| ID | 7388328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 152564 |
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| End bp | 154192 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643649884 |
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| Product | MFS permease |
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| Protein accession | YP_002548102 |
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| Protein GI | 222147145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGACA GAAAATCATC ATTGGCGCCT TTCAAGAACC AGATCTTTCT GACGATCTGG
CTGGCCAGCA TCACCTCCAA CTTCGGCGGC CTGATCCAGG ATGTCGGTGC CGCCTGGATG
ATGACATCAA TCTCCTCTTC GGAAAGCATG GTGGCGCTGG TTCAGGCCTC CAATACCGCG
CCGATCATGC TGTTTTCGCT GGTGGCCGGG GCGCTGGCCG ATGGGTTCGA CCGCCGCCGG
GTCATGCTGT TTGCGCAGGT CTTTCTGTTG ACCGTCTCGG CGCTTCTGTC GCTCTTTACG
TGGTTTGGCC TCTTGACCCC ATGGTCGCTT CTGGCCTTCA CCTTTCTGAT CGGCTGCGGA
ACGGCCTTGA ACAGCCCGGC CTGGCAAGCC TCGGTCGGCG ATATCGTCGG GCGCGAAGAC
CTACCATCCG CCGTCTCGCT CAACAGCATG GGCTTCAACA TCACCCGCAG CGTCGGCCCA
GCCATTGGCG GCCTGATCGT TGCCGTTGCA GGTGCTGCCA CAGCCTTTGC CATCAACGCT
GTCAGCTACC TGGCGATGAT CTATGCCTTG TTTCGCTGGA AGCCTGTCTA TCCGAAAAAC
ACCCTGCCCC GCGAAAATCT CGGCCACGCC ATCGCCGCTG GCCTGCGCTA CATGGCCATG
TCGCCCAACT TGATGAAAGT GCTGTTTCGC GGCTTTTTCT TCGGCTTTTG CGCAACTGCG
ATCCTGTCGC TATTGCCGCT GGTGGTGAAG GACAATCTCG GCGGCGGTCC ACTCGCCTAT
GGCGGATTGC TCGGCGCTTT CGGGATTGGC GCCATCGCAG GCGCGATTTC CAATGCACGT
ATTCGTGAAA AGCTGAGCAG CGAGCAGATC GTCAGCTGTT CCTTCGCCGG CTTCGCGCTG
GCCTCCGTTC TGACTGGCAT CAGCCATCAT TTCTGGCTGA CAGCCCCTGC CCTGGTGCTG
GCCGGAGCCT GTTGGGTGCT GTCCCTGTCG CTGTTCAACA CGGTGGTGCA GCTTTCGACC
CCGCGTTGGG TAGTGGGCCG GGCATTGTCG CTCTACCAGA CCGCCACCTT CGGCGGTATG
GCGGGCGGTG CCTGGATCTG GGGCCTGCTG GCCGAATCCG GCAGCGCAGG TCATGCCCTG
GTGATGGCGG CCGGGCTGAT GGCTCTCGGT GTCGGCATTG GTCTCGCCTT GCCGATGCCT
GCCTTTGCGA CGCTGGATCT CAACCCGCTC AACCGTTTCA ACGAGCCGCC CCTGCGGCTG
GATATCCGCC CACGCAGCGG CCCAATCGTT ATCCAGATCG ATTTCGAGAT CGACGACAAG
GACGTGCCGG AATTCCTGGA GGTTATGGTT GAGCGCAGGC GCATCCGCCT GCGAGATGGT
GCGCAGAACT GGGCGCTGAT GCGCGACCTG GAAAATCCGG ATATCTGGAC GGAAACCTAT
CACACCCCGA CCTGGGTCGA TTACGTGCGC CACAACCATC GCCGCACCAA GGCCGATGCC
GAAATCACCG ACCGGCTGGG AGACCTGCAC AAAGGCTCAA AACCACCGCA TGTCCACCGG
ATGATCGAAC GCCAAACCAT TCCGCCTGCC GACGACATAT TTCACAAACC GCATATCGAT
CATCATTGA
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| Protein sequence | MPDRKSSLAP FKNQIFLTIW LASITSNFGG LIQDVGAAWM MTSISSSESM VALVQASNTA
PIMLFSLVAG ALADGFDRRR VMLFAQVFLL TVSALLSLFT WFGLLTPWSL LAFTFLIGCG
TALNSPAWQA SVGDIVGRED LPSAVSLNSM GFNITRSVGP AIGGLIVAVA GAATAFAINA
VSYLAMIYAL FRWKPVYPKN TLPRENLGHA IAAGLRYMAM SPNLMKVLFR GFFFGFCATA
ILSLLPLVVK DNLGGGPLAY GGLLGAFGIG AIAGAISNAR IREKLSSEQI VSCSFAGFAL
ASVLTGISHH FWLTAPALVL AGACWVLSLS LFNTVVQLST PRWVVGRALS LYQTATFGGM
AGGAWIWGLL AESGSAGHAL VMAAGLMALG VGIGLALPMP AFATLDLNPL NRFNEPPLRL
DIRPRSGPIV IQIDFEIDDK DVPEFLEVMV ERRRIRLRDG AQNWALMRDL ENPDIWTETY
HTPTWVDYVR HNHRRTKADA EITDRLGDLH KGSKPPHVHR MIERQTIPPA DDIFHKPHID
HH
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