| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0142 |
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| Symbol | cspA |
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| ID | 7388311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 126916 |
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| End bp | 127140 |
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| Gene Length | 225 bp |
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| Protein Length | 74 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643649867 |
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| Product | cold shock protein |
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| Protein accession | YP_002548085 |
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| Protein GI | 222147128 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGGGT TCATCATGAC CACTGGCACA GTTAAATGGT TTAATTCCAC TAAGGGCTTC
GGCTTCATTC AGCCTGACAA TGGCGGCCCA GATGCATTCG TGCATATCTC TGCTGTTGAA
CGCGCTGGTA TGCGTGAAAT CGTCGAAGGC CAGAAGATCG CCTACGACAT GGAACGCGAC
AACAAGTCCG GCAAGATGTC GGCCTGCAAT CTCCAGGCTG CTTAA
|
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| Protein sequence | MKGFIMTTGT VKWFNSTKGF GFIQPDNGGP DAFVHISAVE RAGMREIVEG QKIAYDMERD
NKSGKMSACN LQAA
|
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| |