Gene Avi_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0118 
SymbollepA 
ID7388296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp110502 
End bp112379 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content58% 
IMG OID643649852 
ProductGTP-binding protein LepA 
Protein accessionYP_002548070 
Protein GI222147113 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0702827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCA TTTCCGCTTT GCGGCATGCG GGCGCGCTGC TATATGCGCA GGCCATGAGC 
ACACAGAACC GCACGCCTCT CGACCATATC CGCAACTTTT CCATCGTCGC CCATATCGAC
CATGGAAAAT CGACGCTGGC CGACCGCCTG ATCCAGAATA CCGGCGGCCT TGCCGAACGG
GAAATGTCGG AACAGGTGCT CGACAGCATG GACATCGAGC GCGAGCGCGG CATCACCATT
AAGGCCCAGA CCGTGCGTCT GCATTACAAG GCCAATAATG GTGAAACCTA TGTGCTGAAC
CTGATCGACA CGCCCGGCCA TGTGGACTTC GCCTATGAAG TCTCGCGGTC GCTGTCGGCC
TGCGAAGGTT CGCTGCTGGT GGTGGATGCG TCCCAGGGCG TTGAAGCCCA GACGCTGGCC
AATGTCTATC AGGCCATCGA CAACAATCAT GAGATCGTCA CCGTTCTCAA CAAGATCGAC
TTGCCTGCCG CCGAACCGGA CCGGATCAAG GAGCAGATTG AGGAAGTCAT CGGCATCGAT
GCCTCCGAAG CCGTGCTGAT TTCGGCCAAG ACCGGGCTTG GTATTCCCGA CGTCTTGGAA
GCGATCGTTC ACAAGTTGCC CGCGCCGAAA AGCGCGCTGG GCGACAAGGG GCCGCTGAAA
GCGCTGCTGG TCGATAGCTG GTACGATACC TATCTCGGCG TCATGGTTCT GGTGCGCGTT
ATCGATGGCG TGCTGACCAA GGGCCAGACT ATCCGGATGA TGGGGACGGA TGCCAAATAC
CAGGTAGAGC GCGTTGGCGT GCTGACGCCG AAAATGGTCG CCATGGACAG TCTCGGTCCC
GGCGAAATCG GTTTCTTCAC CGGTTCGATC AAAGAAGTGG CCGATACCCG CGTCGGCGAT
ACCATTACCG AAGACAAGCG TCCGACGGAA ACGATGCTGC CCGGCTTCAA ACCTGCCCAG
CCGGTGGTGT TCTGTGGGTT GTTCCCGGTT GACGCCGCCG ATTTCGAGGA TCTTCGTGCT
GCGATGGGCA AGCTGCGTCT CAATGATGCC AGCTTCTCTT TTGAGATGGA AAGCTCGGCG
GCTCTCGGCT TCGGCTTCCG CTGTGGCTTC CTTGGCCTGT TGCATCTGGA AATCATCCAG
GAGCGGCTTG AGCGTGAATT CGATCTCGAC CTGATCGCCA CGGCCCCTTC GGTTGTCTAC
AAGCTGTTCA TGACCGATGG CAGCGAGCGT GAGCTGCACA ATCCCGCCGA TATGCCTGAC
GTGGTGAAGA TCTCCGAGAT CCACGAGCCC TGGATCAAGG CGACGATCTT GACGCCGGAC
GATTATCTCG GCGGCATCCT GAAGCTTTGC CAGGACCGGC GCGGCATCCA GACCGAACTC
ACTTACGTGG GCAAGCGGGC CATGCTGACC TATGAGCTGC CACTCAACGA AGTGGTGTTC
GATTTCTACG ACAGATTGAA ATCGATTTCC AAGGGCTATG CCTCGTTCGA TTACCATCTG
GATGGCCACA AGGAAGGCAA TCTCGTCAAG ATGTCGATCC TCGTCAATGG CGAGCCGGTC
GATGCATTGT CGATGATGGT TCACCGCATG GCAGCTGAAA AGCGTGGCCG TGACATGTGC
GAAAAGCTCA AGGACCTGAT CCCCAAGCAC ATGTTCAAGA TCCCGATCCA GGCCGCTATC
GGCAGCAATG TCATCGCCCG CGAAACCATT TCGGCGCTGC GCAAGGACGT GACCGCCAAG
TGCTACGGTG GCGATGCCAG CCGCAAGCGC AAGCTGCTGG ACAAGCAGAA GGCCGGCAAG
AAGCGGATGC GCCAGTTCGG CAAGGTCGAA ATCCCGCAGG AAGCGTTTAT TGCCGCTCTG
AAAATGAGCG ACGAATAA
 
Protein sequence
MPRISALRHA GALLYAQAMS TQNRTPLDHI RNFSIVAHID HGKSTLADRL IQNTGGLAER 
EMSEQVLDSM DIERERGITI KAQTVRLHYK ANNGETYVLN LIDTPGHVDF AYEVSRSLSA
CEGSLLVVDA SQGVEAQTLA NVYQAIDNNH EIVTVLNKID LPAAEPDRIK EQIEEVIGID
ASEAVLISAK TGLGIPDVLE AIVHKLPAPK SALGDKGPLK ALLVDSWYDT YLGVMVLVRV
IDGVLTKGQT IRMMGTDAKY QVERVGVLTP KMVAMDSLGP GEIGFFTGSI KEVADTRVGD
TITEDKRPTE TMLPGFKPAQ PVVFCGLFPV DAADFEDLRA AMGKLRLNDA SFSFEMESSA
ALGFGFRCGF LGLLHLEIIQ ERLEREFDLD LIATAPSVVY KLFMTDGSER ELHNPADMPD
VVKISEIHEP WIKATILTPD DYLGGILKLC QDRRGIQTEL TYVGKRAMLT YELPLNEVVF
DFYDRLKSIS KGYASFDYHL DGHKEGNLVK MSILVNGEPV DALSMMVHRM AAEKRGRDMC
EKLKDLIPKH MFKIPIQAAI GSNVIARETI SALRKDVTAK CYGGDASRKR KLLDKQKAGK
KRMRQFGKVE IPQEAFIAAL KMSDE