Gene Avi_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0109 
Symbol 
ID7388288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp104374 
End bp104817 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content59% 
IMG OID643649844 
Producthypothetical protein 
Protein accessionYP_002548062 
Protein GI222147105 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.648306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA ACAAAATAGC CTTGAGGAGA CCGATCTTGG AGCTTTTCCG TCTCGATGAA 
CGGCTGGCGC GCGACAGCCA GTCAATCTTG CAGCTGCCGT TAAGCGACCT GCGCCTGTCC
AGGGATAGCC GCTGGCCCTG GCTGATCCTC GTGCCGCGCC GCAATGATGT CGCTGAGATT
TTCGAGCTTT CCAAGGACGA CCAGATCCAG CTGCTGCACG AACAGGTGCA CGTCGGCTCC
GCCTTAAAAA CCGCGACCGG CGCCACCAAG ATCAACATCG CCGCCATTGG CAATGTGGTG
CGCCAGCTCC ATGTTCATGT CGTTGCCCGC TTTGAAACCG ACCCGAACTG GCCTGGGCCG
ATCTGGGGAC ATGGGGTGGC AGAGCCCTAT TCGGACACAG CCCTTGCGAC GATGACAACG
ACAATTCTGG ATGCGCTGAC ATGA
 
Protein sequence
MRKNKIALRR PILELFRLDE RLARDSQSIL QLPLSDLRLS RDSRWPWLIL VPRRNDVAEI 
FELSKDDQIQ LLHEQVHVGS ALKTATGATK INIAAIGNVV RQLHVHVVAR FETDPNWPGP
IWGHGVAEPY SDTALATMTT TILDALT