Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0109 |
Symbol | |
ID | 7388288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 104374 |
End bp | 104817 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649844 |
Product | hypothetical protein |
Protein accession | YP_002548062 |
Protein GI | 222147105 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.648306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTAAAA ACAAAATAGC CTTGAGGAGA CCGATCTTGG AGCTTTTCCG TCTCGATGAA CGGCTGGCGC GCGACAGCCA GTCAATCTTG CAGCTGCCGT TAAGCGACCT GCGCCTGTCC AGGGATAGCC GCTGGCCCTG GCTGATCCTC GTGCCGCGCC GCAATGATGT CGCTGAGATT TTCGAGCTTT CCAAGGACGA CCAGATCCAG CTGCTGCACG AACAGGTGCA CGTCGGCTCC GCCTTAAAAA CCGCGACCGG CGCCACCAAG ATCAACATCG CCGCCATTGG CAATGTGGTG CGCCAGCTCC ATGTTCATGT CGTTGCCCGC TTTGAAACCG ACCCGAACTG GCCTGGGCCG ATCTGGGGAC ATGGGGTGGC AGAGCCCTAT TCGGACACAG CCCTTGCGAC GATGACAACG ACAATTCTGG ATGCGCTGAC ATGA
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Protein sequence | MRKNKIALRR PILELFRLDE RLARDSQSIL QLPLSDLRLS RDSRWPWLIL VPRRNDVAEI FELSKDDQIQ LLHEQVHVGS ALKTATGATK INIAAIGNVV RQLHVHVVAR FETDPNWPGP IWGHGVAEPY SDTALATMTT TILDALT
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