Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0105 |
Symbol | pheA |
ID | 7388285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 100306 |
End bp | 101103 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649841 |
Product | prephenate dehydratase |
Protein accession | YP_002548059 |
Protein GI | 222147102 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTGCC GCGATATGTT CCCGGATATG GAGCCTTTGC CATGCCCGAC ATTCGAGGAC GCTTTCACGG CGTTGGAAAA CGGCGAGGCG GATCTGGCGA TGATCCCGAT TGAAAACACC CTGGCTGGGC GGGTCGCCGA TATTCACTAT CTGCTGCCGC TGTCACGCCT GAAGATTATC GGTGAATATT TCATGCCGAT CCGGTTTCAG CTCATGGTGC TGCCGGGGGT GAAGGCCGAG GAGATCCGCA CGGTCCACAG CCACATCCAT GCGCTCGGCC AATGCCGGAA GATCATCCGT AGCCATGGCT GGAAGGCCGT GGTGGCGGGC GATACGGCAG GGGCTGCCAA GCAGGTTGCG GAACTGGGCG ACCGCTCCAT GGCGGCCTTG GCACCGCGCC TGGCCGCCTC GCTCTATGGG CTGGATATTC TCGCCGAAAA TGTCGAGGAT TCCGAAAACA ACATCACCCG CTTCGTTGTG CTGTCGCGCG ATGAGATGGC GTTGACGCGG GCGGCTGCGG ATGAAAGCTT CATCACCACC TTCGTTTTCA ATGTCCGCAA TATTCCGGCA GCGCTGTACA AGGCCATGGG TGGTTTTGCC ACCAATGGGG TCAATATGAC CAAGCTGGAA AGCTACCAGA TCGGCGGCAA ATTCATCGCC ACCCAGTTTT ATGCCGATAT CGAAGGGCAT CCAGAGGATG CGCCGGTCAA GCGGGCGCTG GAGGAATTGC GCTTCTTCTC CGAGAAGGTC CACATTCTCG GCGTCTACAA GGCTCACGCC ATGCGCGGCA AGTTTTAA
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Protein sequence | MACRDMFPDM EPLPCPTFED AFTALENGEA DLAMIPIENT LAGRVADIHY LLPLSRLKII GEYFMPIRFQ LMVLPGVKAE EIRTVHSHIH ALGQCRKIIR SHGWKAVVAG DTAGAAKQVA ELGDRSMAAL APRLAASLYG LDILAENVED SENNITRFVV LSRDEMALTR AAADESFITT FVFNVRNIPA ALYKAMGGFA TNGVNMTKLE SYQIGGKFIA TQFYADIEGH PEDAPVKRAL EELRFFSEKV HILGVYKAHA MRGKF
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