Gene Avi_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0105 
SymbolpheA 
ID7388285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp100306 
End bp101103 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content59% 
IMG OID643649841 
Productprephenate dehydratase 
Protein accessionYP_002548059 
Protein GI222147102 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTGCC GCGATATGTT CCCGGATATG GAGCCTTTGC CATGCCCGAC ATTCGAGGAC 
GCTTTCACGG CGTTGGAAAA CGGCGAGGCG GATCTGGCGA TGATCCCGAT TGAAAACACC
CTGGCTGGGC GGGTCGCCGA TATTCACTAT CTGCTGCCGC TGTCACGCCT GAAGATTATC
GGTGAATATT TCATGCCGAT CCGGTTTCAG CTCATGGTGC TGCCGGGGGT GAAGGCCGAG
GAGATCCGCA CGGTCCACAG CCACATCCAT GCGCTCGGCC AATGCCGGAA GATCATCCGT
AGCCATGGCT GGAAGGCCGT GGTGGCGGGC GATACGGCAG GGGCTGCCAA GCAGGTTGCG
GAACTGGGCG ACCGCTCCAT GGCGGCCTTG GCACCGCGCC TGGCCGCCTC GCTCTATGGG
CTGGATATTC TCGCCGAAAA TGTCGAGGAT TCCGAAAACA ACATCACCCG CTTCGTTGTG
CTGTCGCGCG ATGAGATGGC GTTGACGCGG GCGGCTGCGG ATGAAAGCTT CATCACCACC
TTCGTTTTCA ATGTCCGCAA TATTCCGGCA GCGCTGTACA AGGCCATGGG TGGTTTTGCC
ACCAATGGGG TCAATATGAC CAAGCTGGAA AGCTACCAGA TCGGCGGCAA ATTCATCGCC
ACCCAGTTTT ATGCCGATAT CGAAGGGCAT CCAGAGGATG CGCCGGTCAA GCGGGCGCTG
GAGGAATTGC GCTTCTTCTC CGAGAAGGTC CACATTCTCG GCGTCTACAA GGCTCACGCC
ATGCGCGGCA AGTTTTAA
 
Protein sequence
MACRDMFPDM EPLPCPTFED AFTALENGEA DLAMIPIENT LAGRVADIHY LLPLSRLKII 
GEYFMPIRFQ LMVLPGVKAE EIRTVHSHIH ALGQCRKIIR SHGWKAVVAG DTAGAAKQVA
ELGDRSMAAL APRLAASLYG LDILAENVED SENNITRFVV LSRDEMALTR AAADESFITT
FVFNVRNIPA ALYKAMGGFA TNGVNMTKLE SYQIGGKFIA TQFYADIEGH PEDAPVKRAL
EELRFFSEKV HILGVYKAHA MRGKF