| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0100 |
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| Symbol | |
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| ID | 7388282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 96896 |
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| End bp | 98620 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643649838 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548056 |
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| Protein GI | 222147099 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0356789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGAA AGCACTTAAT GACGACAACG GCGGCGATGC TGCTGGCCAT GACTGGTGCT
GCCTATGCCG GTATGGATGA GGCCAAGCAA TTTCTCGATG AGGAGATCAA GGGGGAATCC
TCGCTGTCGC GGGCGGATCA GGAAAAGCAG ATGCAATGGT ATGTGGATGC TGCCAAGCCC
TTTTCGGGCA TGGAAATCCA TGTCGTTTCC GAATCGCTGA CCACCCATGC CTACGAATCC
AAGGTGCTGG CGCCGTGGTT CAGCAAGATC ACCGGCATCA AGCTTACTCA CGACGTCATT
CAGGAGGGTG ATGTCGTCGA GAAGATCCAG ACCCAGATGC AGACCGGCCA GAACCTCTAT
GACGGCTGGG TCAACGATTC CGACTTCATC GGCACCCATT GGCGCTATGG TCAGGTCCGC
AACCTGACGG ACTGGATGAC GGGCGAGGGC AAGGATGTCA CCGATCCGAT GCTGGATTTG
AAGGATTATA TCGGCCTGTC CTTCACGACA GCCCCGGATG GCAAGCTCTA CCAGCTTCCC
GACCAGCAAT TCGCCAACCT CTACTGGTTC CGCTACGATT GGTTCAACGA CCCGAAGATC
AAGGAAGAGT TCAAGAAGGA ATACGGTTAC GAGCTGGGTG TGCCGGTCAA CTGGTCGGCC
TATGAGGATA TTGCCAAATT CTTCACCGGA CGCGAGATTG GCGGCAAGAA AGTCTATGGC
AGCATGGACT ATGGCAAGAA GGACCCCTCG CTCGGTTGGC GCTTTACCGA TGCCTGGCTG
TCGATGGCCG GTAATGGCGA CAAAGGTCTG CCGAATGGTA AGCCCGTCGA CGAATGGGGC
ATCCGTGTCA ACGACAAGGA CCAGCCGACC GGTTCCTGCG TCGATCGCGG TGGGGATACC
AATGGGGCGG CCTCGGTCTA TGCCGTCACC AAATATCTGG AATGGTTGAA GAAATATACC
CCGCCAGAAG CGCAGGGCAT GACCTTCTCC GAATCCGGCC CGGTTCCCGC CCAGGGCAAT
ATCGCCCAGC AGATCTTCTG GTACACGGCC TTTACCGCCG ATATGGCCAA GCCCGGTTTG
CCTGTGGTCA ATGACGACGG CACGCCGAAA TGGCGTGTGG CACCATCGCC GCATGGTTCC
TACTGGCATG AAGGCCAGAA GCTCGGCTAT CAGGATGTCG GCTCCTGGAC GCTGATGAAA
TCCACGCCCA CGGATCGCGC CAAGGCTGCC TGGCTCTATG CCCAGTTCGT CACCTCGAAA
ACTGTTGACG TGAAGAAAAG CCAGACCGGT CTGACTTTCA TCCGTCAGTC GTCCATCATG
GACAAGACCT TCACCGACCG CGCCCCGAAA CTCGGTGGTC TGGTGGAATT CTACAGGTCG
CCTGCCCGCG TCCAATGGAC GCCAACCGGA ACCAATGTGC CTGATTATCC GAAGCTGGCG
CAATTGTGGT GGCAGAATAT TGGCGATGCG GCAGCCGGTG CCAAGACCCC GCAGGAAGCC
ATGGATGCCT TGTGCAAGGC GCAGGACGGC ATTCTCTCCC GTCTGGAACG CGCCAAGGTG
CAGGGCGAAT TCGGCCCCAA GCTGAACGAG CCGAAGGACG CCGCCTATTG GGAAAAATAC
GCCAAGGACC ACGGCAGCCT TGCGCCGCAG CCCAAGCTGG CTAACGAAAA GGAAAAGCCG
ATCACCATCA ATTACGACGA ATTGGTGAAG AGCTGGCAGA AGTAA
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| Protein sequence | MMRKHLMTTT AAMLLAMTGA AYAGMDEAKQ FLDEEIKGES SLSRADQEKQ MQWYVDAAKP
FSGMEIHVVS ESLTTHAYES KVLAPWFSKI TGIKLTHDVI QEGDVVEKIQ TQMQTGQNLY
DGWVNDSDFI GTHWRYGQVR NLTDWMTGEG KDVTDPMLDL KDYIGLSFTT APDGKLYQLP
DQQFANLYWF RYDWFNDPKI KEEFKKEYGY ELGVPVNWSA YEDIAKFFTG REIGGKKVYG
SMDYGKKDPS LGWRFTDAWL SMAGNGDKGL PNGKPVDEWG IRVNDKDQPT GSCVDRGGDT
NGAASVYAVT KYLEWLKKYT PPEAQGMTFS ESGPVPAQGN IAQQIFWYTA FTADMAKPGL
PVVNDDGTPK WRVAPSPHGS YWHEGQKLGY QDVGSWTLMK STPTDRAKAA WLYAQFVTSK
TVDVKKSQTG LTFIRQSSIM DKTFTDRAPK LGGLVEFYRS PARVQWTPTG TNVPDYPKLA
QLWWQNIGDA AAGAKTPQEA MDALCKAQDG ILSRLERAKV QGEFGPKLNE PKDAAYWEKY
AKDHGSLAPQ PKLANEKEKP ITINYDELVK SWQK
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