Gene Avi_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0097 
Symbol 
ID7388279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp94855 
End bp95742 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content57% 
IMG OID643649835 
ProductABC transporter membrane spanning protein (sugar) 
Protein accessionYP_002548053 
Protein GI222147096 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGA CCTGGAACAA CAAGGCCTGG TTTCTGGTGC TGCCCGTGCT GCTGCTGGTG 
GCTTTTTCCG CTGTCATTCC GCTGATGACC GTGGTGAACT ATTCGGTGCA GGACACGTTC
GGCAATAACG ACTTCTTCTG GGCCGGTTCC GATTGGTTTA CCCAGACGCT GCAATCGGAA
CGGTTCTGGG ATGCGCTGTG GCGTAACCTG ATCTTCTCGA TGATCATTCT CGCCATCGAA
GTGCCGCTTG GCATCCTGAT CGCGCTGAAC ATGCCGAAGA CCGGGCTCGG TGTGCCGGTC
TGCCTGGTGC TGATGGCCCT GCCGTTGTTG ATCCCGTGGA ATGTGGTCGG CACCATCTGG
CAGGTGTTCG GACGCAGCGA TATTGGCCTG CTCGGCTATA CCCTCAACGC CGTTGGTCTC
GATTATAATT ATGTGGCGAA TCCATTCGAT GCCTGGGCGA CCATCGTCGT CATGGATGTC
TGGCATTGGA CCAGCCTTGT TGTGCTGCTG TGCTATGCCG GTCTGGTGTC GATCCCGGAT
GCCTATTACC AGGCGGCCCG GATTGATGGC GCCTCGCGCT GGTCGGTGTT TCGCTATATC
CAGCTGCCAA AGATGAAACA GGTGCTGCTG ATCGCCGTGC TGCTGCGCTT CATGGACAGT
TTCATGATCT ATACCGAGCC TTTCGTCGTC ACCGGCGGCG GTCCGGGCAA TTCCACCACC
TTCCTGTCGA TCGATCTGGT GAAAATGGCG CTCGGCCAGT TCGATCTCGG ACCTGCGGCA
GCGATGTCGA TCATCTACTT CCTGATCATT CTGCTGCTGT CCTGGGTCTT CTACACTGTC
ATGACCCATA GTGACGCCCA GAGTGCGTCA GCACCGAAGG GAGACTAA
 
Protein sequence
MNKTWNNKAW FLVLPVLLLV AFSAVIPLMT VVNYSVQDTF GNNDFFWAGS DWFTQTLQSE 
RFWDALWRNL IFSMIILAIE VPLGILIALN MPKTGLGVPV CLVLMALPLL IPWNVVGTIW
QVFGRSDIGL LGYTLNAVGL DYNYVANPFD AWATIVVMDV WHWTSLVVLL CYAGLVSIPD
AYYQAARIDG ASRWSVFRYI QLPKMKQVLL IAVLLRFMDS FMIYTEPFVV TGGGPGNSTT
FLSIDLVKMA LGQFDLGPAA AMSIIYFLII LLLSWVFYTV MTHSDAQSAS APKGD