Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0097 |
Symbol | |
ID | 7388279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 94855 |
End bp | 95742 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649835 |
Product | ABC transporter membrane spanning protein (sugar) |
Protein accession | YP_002548053 |
Protein GI | 222147096 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGA CCTGGAACAA CAAGGCCTGG TTTCTGGTGC TGCCCGTGCT GCTGCTGGTG GCTTTTTCCG CTGTCATTCC GCTGATGACC GTGGTGAACT ATTCGGTGCA GGACACGTTC GGCAATAACG ACTTCTTCTG GGCCGGTTCC GATTGGTTTA CCCAGACGCT GCAATCGGAA CGGTTCTGGG ATGCGCTGTG GCGTAACCTG ATCTTCTCGA TGATCATTCT CGCCATCGAA GTGCCGCTTG GCATCCTGAT CGCGCTGAAC ATGCCGAAGA CCGGGCTCGG TGTGCCGGTC TGCCTGGTGC TGATGGCCCT GCCGTTGTTG ATCCCGTGGA ATGTGGTCGG CACCATCTGG CAGGTGTTCG GACGCAGCGA TATTGGCCTG CTCGGCTATA CCCTCAACGC CGTTGGTCTC GATTATAATT ATGTGGCGAA TCCATTCGAT GCCTGGGCGA CCATCGTCGT CATGGATGTC TGGCATTGGA CCAGCCTTGT TGTGCTGCTG TGCTATGCCG GTCTGGTGTC GATCCCGGAT GCCTATTACC AGGCGGCCCG GATTGATGGC GCCTCGCGCT GGTCGGTGTT TCGCTATATC CAGCTGCCAA AGATGAAACA GGTGCTGCTG ATCGCCGTGC TGCTGCGCTT CATGGACAGT TTCATGATCT ATACCGAGCC TTTCGTCGTC ACCGGCGGCG GTCCGGGCAA TTCCACCACC TTCCTGTCGA TCGATCTGGT GAAAATGGCG CTCGGCCAGT TCGATCTCGG ACCTGCGGCA GCGATGTCGA TCATCTACTT CCTGATCATT CTGCTGCTGT CCTGGGTCTT CTACACTGTC ATGACCCATA GTGACGCCCA GAGTGCGTCA GCACCGAAGG GAGACTAA
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Protein sequence | MNKTWNNKAW FLVLPVLLLV AFSAVIPLMT VVNYSVQDTF GNNDFFWAGS DWFTQTLQSE RFWDALWRNL IFSMIILAIE VPLGILIALN MPKTGLGVPV CLVLMALPLL IPWNVVGTIW QVFGRSDIGL LGYTLNAVGL DYNYVANPFD AWATIVVMDV WHWTSLVVLL CYAGLVSIPD AYYQAARIDG ASRWSVFRYI QLPKMKQVLL IAVLLRFMDS FMIYTEPFVV TGGGPGNSTT FLSIDLVKMA LGQFDLGPAA AMSIIYFLII LLLSWVFYTV MTHSDAQSAS APKGD
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