Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0096 |
Symbol | |
ID | 7388278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 93764 |
End bp | 94858 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649834 |
Product | ABC transporter nucleotide binding/ATPase protein (sugar) |
Protein accession | YP_002548052 |
Protein GI | 222147095 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCGAA TTTCCCTCGA TCATATCCGC CACGCCTATG GCCCGAAGGG GCTGGCCAAT CCGCTCTATG CGCTGAAGGA AGTGCATCAC GAGTTTGACG ATGGCGGTGC CTATGCGCTG CTCGGTCCCT CCGGCTGTGG CAAGACCACC TTGCTCAACA TCATGTCCGG CCTGTTGCAG CCTTCGGATG GGCGCATCCT GTTTGGCGAT AAGGATGTGA CGCACTTGTC CACCGAGGCG CGCAACATTG CCCAGGTGTT CCAGTTTCCC GTCGTCTACG ACACCATGAC GGTTTACGAC AATCTGGCCT TTCCGCTCAG AAATCGGCGT GTGCCGGAGG TGGAAGTCGA TGCCAGGGTG CGCACCATCC TGAAGATGAT CGACCTCGAA GCCTGGGCCA AGCGCAAGGC GCAGGGTCTG ACCGCCGACC AGAAGCAGAA GATTTCACTT GGTCGCGGAT TGGTGCGCTC CGATGTCAAT GCCATCCTGT TCGACGAGCC GCTGACGGTG ATCGATCCGC ATATGAAATG GATGCTGCGC GCCCAACTCA AGCAATTGCA CCGGGAATTC GCCTATACCA TGGTCTATGT CACCCATGAC CAGACCGAGG CCCTGACCTT CGCCGACAAG GTGGTGGTGA TGTATGACGG GCAAATCGTC CAGATCGGTA CGCCAGCCGA GTTGTTCGAC CGGCCTAAAC ATACATTCGT CGGTTATTTC ATCGGCTCGC CGGGCATGAA CGTGCTGGCC GCCGGTATCG ATGGCGATAC CGCGATGATC GGCGGTGAGC GGGTCGCTCT TCCGGGCCGT CCGGTCATTC CCGGGGAAGC CCTTACCGAG CTTGGCATTC GCCCGGAATT CATTCGCCTT GGCCGCGAGG GCATGCCGGT GCAGATTTCC AAAGTCGAGG ATATCGGACG CCAGAAAATC GTGCGCGCCC GTTTTGCCGA CCAGCCGATT TCTATCGTGC TGCGGGAGGA TGCCGATATT CCCGCTGAGC CAAAGGTTAG CTTCGATCCG ACCGCCATCA ACATCTACGC AAATTCCTGG CGGGTCGATT TCGCCGGTGC CGGATTGGGA GGTGTAAGGC CATGA
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Protein sequence | MARISLDHIR HAYGPKGLAN PLYALKEVHH EFDDGGAYAL LGPSGCGKTT LLNIMSGLLQ PSDGRILFGD KDVTHLSTEA RNIAQVFQFP VVYDTMTVYD NLAFPLRNRR VPEVEVDARV RTILKMIDLE AWAKRKAQGL TADQKQKISL GRGLVRSDVN AILFDEPLTV IDPHMKWMLR AQLKQLHREF AYTMVYVTHD QTEALTFADK VVVMYDGQIV QIGTPAELFD RPKHTFVGYF IGSPGMNVLA AGIDGDTAMI GGERVALPGR PVIPGEALTE LGIRPEFIRL GREGMPVQIS KVEDIGRQKI VRARFADQPI SIVLREDADI PAEPKVSFDP TAINIYANSW RVDFAGAGLG GVRP
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