Gene Avi_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0096 
Symbol 
ID7388278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp93764 
End bp94858 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content59% 
IMG OID643649834 
ProductABC transporter nucleotide binding/ATPase protein (sugar) 
Protein accessionYP_002548052 
Protein GI222147095 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGAA TTTCCCTCGA TCATATCCGC CACGCCTATG GCCCGAAGGG GCTGGCCAAT 
CCGCTCTATG CGCTGAAGGA AGTGCATCAC GAGTTTGACG ATGGCGGTGC CTATGCGCTG
CTCGGTCCCT CCGGCTGTGG CAAGACCACC TTGCTCAACA TCATGTCCGG CCTGTTGCAG
CCTTCGGATG GGCGCATCCT GTTTGGCGAT AAGGATGTGA CGCACTTGTC CACCGAGGCG
CGCAACATTG CCCAGGTGTT CCAGTTTCCC GTCGTCTACG ACACCATGAC GGTTTACGAC
AATCTGGCCT TTCCGCTCAG AAATCGGCGT GTGCCGGAGG TGGAAGTCGA TGCCAGGGTG
CGCACCATCC TGAAGATGAT CGACCTCGAA GCCTGGGCCA AGCGCAAGGC GCAGGGTCTG
ACCGCCGACC AGAAGCAGAA GATTTCACTT GGTCGCGGAT TGGTGCGCTC CGATGTCAAT
GCCATCCTGT TCGACGAGCC GCTGACGGTG ATCGATCCGC ATATGAAATG GATGCTGCGC
GCCCAACTCA AGCAATTGCA CCGGGAATTC GCCTATACCA TGGTCTATGT CACCCATGAC
CAGACCGAGG CCCTGACCTT CGCCGACAAG GTGGTGGTGA TGTATGACGG GCAAATCGTC
CAGATCGGTA CGCCAGCCGA GTTGTTCGAC CGGCCTAAAC ATACATTCGT CGGTTATTTC
ATCGGCTCGC CGGGCATGAA CGTGCTGGCC GCCGGTATCG ATGGCGATAC CGCGATGATC
GGCGGTGAGC GGGTCGCTCT TCCGGGCCGT CCGGTCATTC CCGGGGAAGC CCTTACCGAG
CTTGGCATTC GCCCGGAATT CATTCGCCTT GGCCGCGAGG GCATGCCGGT GCAGATTTCC
AAAGTCGAGG ATATCGGACG CCAGAAAATC GTGCGCGCCC GTTTTGCCGA CCAGCCGATT
TCTATCGTGC TGCGGGAGGA TGCCGATATT CCCGCTGAGC CAAAGGTTAG CTTCGATCCG
ACCGCCATCA ACATCTACGC AAATTCCTGG CGGGTCGATT TCGCCGGTGC CGGATTGGGA
GGTGTAAGGC CATGA
 
Protein sequence
MARISLDHIR HAYGPKGLAN PLYALKEVHH EFDDGGAYAL LGPSGCGKTT LLNIMSGLLQ 
PSDGRILFGD KDVTHLSTEA RNIAQVFQFP VVYDTMTVYD NLAFPLRNRR VPEVEVDARV
RTILKMIDLE AWAKRKAQGL TADQKQKISL GRGLVRSDVN AILFDEPLTV IDPHMKWMLR
AQLKQLHREF AYTMVYVTHD QTEALTFADK VVVMYDGQIV QIGTPAELFD RPKHTFVGYF
IGSPGMNVLA AGIDGDTAMI GGERVALPGR PVIPGEALTE LGIRPEFIRL GREGMPVQIS
KVEDIGRQKI VRARFADQPI SIVLREDADI PAEPKVSFDP TAINIYANSW RVDFAGAGLG
GVRP