Gene Avi_0095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0095 
Symbol 
ID7388277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp92657 
End bp93760 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content61% 
IMG OID643649833 
ProductABC transporter nucleotide binding/ATPase protein (sugar) 
Protein accessionYP_002548051 
Protein GI222147094 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAT TGCGAAACCT GTCCAAGGTG GTGGCGGGGG ATGTTCACAT TCATCCCGTC 
AACCTGACCC TGCAACGCGG GTCGCTGAAC GTTCTGCTTG GGCCGACCCT GTCGGGCAAG
ACATCGTTGA TGCGGCTGAT GGCCGGGCTG GACAAACCGA CGTCAGGTTC CCTGCTGTTT
GATGGCAAGG ACGTCACCGG GTTGCGGGTG CAGGACCGGT CGGTTGCCAT GGTCTACCAG
CAATTCATCA ATTATCCGGC CCTCAGCGTC TATGAAAACA TCGCCTCGCC GCTCAGGGTG
CGCAAGGTCG ATAGGGCCAC CATAGACCGC GAAGTGAAAA AAGCCGCCGA GCTTTTGAAG
CTGACACCCT ATCTGGAGCG CACGCCGCTC AACCTGTCCG GCGGCCAGCA GCAGCGCACG
GCGCTGGCCC GCGCCATCGT CAAGCAGGCA AGCCTGGTGC TGCTGGATGA GCCGCTGGCC
AATCTGGACT ATAAACTGCG TGAGGAATTG CGCGAGGAAC TGCCGAAGAT CTTTGCCGAA
CTGGGCGCAA TTTTCGTCTA TGCGACGACG GAGCCGTCGG AAGCCCTGCT TCTGGGTGGC
CATACCGCCA CGCTGTCGGA AGGCCGCGTC ACGCAATATG GCCCGACCAT CGACGTTTAT
CGCCGCCCGG CGGACCTGAA AACCGCCCGT ACCTTTGCTG ATCCGCCGTT GAACACTGTT
CAGGCCATCC GGCGGGAAGG GCATTTCATG ATCGGCGGTA TTCCGGTTCT GACCGTGCCC
CGGCACCTTG CGCATGTGCC GGAGGAGCCG TTGACGCTGG GCTTTCACCC GCATCACCTG
TCGCTGGCAG GAGCCTCGTC GAGTGAAGGG GTCGCTCCTT TGGTAGCCCG CTCGATGATC
TCGGAAATTT CCGGCTCGGA AAGCTATATT CATCTCGACT ATGCCGGGGA GCGCTGGGTG
ATGCTGGAGC ATGGCATTCA CGATATCGAA CCGGGCCGCG ACGTGCAGGT CCATCTCGAT
ACCCGTCACC TGATGGCCTT CGATGCCAGT GGCCGGGCGC TTGCCGAATA TCTGGCCGGA
CAGCTTGAAG CGCAGGGGGA ATAG
 
Protein sequence
MLELRNLSKV VAGDVHIHPV NLTLQRGSLN VLLGPTLSGK TSLMRLMAGL DKPTSGSLLF 
DGKDVTGLRV QDRSVAMVYQ QFINYPALSV YENIASPLRV RKVDRATIDR EVKKAAELLK
LTPYLERTPL NLSGGQQQRT ALARAIVKQA SLVLLDEPLA NLDYKLREEL REELPKIFAE
LGAIFVYATT EPSEALLLGG HTATLSEGRV TQYGPTIDVY RRPADLKTAR TFADPPLNTV
QAIRREGHFM IGGIPVLTVP RHLAHVPEEP LTLGFHPHHL SLAGASSSEG VAPLVARSMI
SEISGSESYI HLDYAGERWV MLEHGIHDIE PGRDVQVHLD TRHLMAFDAS GRALAEYLAG
QLEAQGE