Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0095 |
Symbol | |
ID | 7388277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 92657 |
End bp | 93760 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649833 |
Product | ABC transporter nucleotide binding/ATPase protein (sugar) |
Protein accession | YP_002548051 |
Protein GI | 222147094 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGAAT TGCGAAACCT GTCCAAGGTG GTGGCGGGGG ATGTTCACAT TCATCCCGTC AACCTGACCC TGCAACGCGG GTCGCTGAAC GTTCTGCTTG GGCCGACCCT GTCGGGCAAG ACATCGTTGA TGCGGCTGAT GGCCGGGCTG GACAAACCGA CGTCAGGTTC CCTGCTGTTT GATGGCAAGG ACGTCACCGG GTTGCGGGTG CAGGACCGGT CGGTTGCCAT GGTCTACCAG CAATTCATCA ATTATCCGGC CCTCAGCGTC TATGAAAACA TCGCCTCGCC GCTCAGGGTG CGCAAGGTCG ATAGGGCCAC CATAGACCGC GAAGTGAAAA AAGCCGCCGA GCTTTTGAAG CTGACACCCT ATCTGGAGCG CACGCCGCTC AACCTGTCCG GCGGCCAGCA GCAGCGCACG GCGCTGGCCC GCGCCATCGT CAAGCAGGCA AGCCTGGTGC TGCTGGATGA GCCGCTGGCC AATCTGGACT ATAAACTGCG TGAGGAATTG CGCGAGGAAC TGCCGAAGAT CTTTGCCGAA CTGGGCGCAA TTTTCGTCTA TGCGACGACG GAGCCGTCGG AAGCCCTGCT TCTGGGTGGC CATACCGCCA CGCTGTCGGA AGGCCGCGTC ACGCAATATG GCCCGACCAT CGACGTTTAT CGCCGCCCGG CGGACCTGAA AACCGCCCGT ACCTTTGCTG ATCCGCCGTT GAACACTGTT CAGGCCATCC GGCGGGAAGG GCATTTCATG ATCGGCGGTA TTCCGGTTCT GACCGTGCCC CGGCACCTTG CGCATGTGCC GGAGGAGCCG TTGACGCTGG GCTTTCACCC GCATCACCTG TCGCTGGCAG GAGCCTCGTC GAGTGAAGGG GTCGCTCCTT TGGTAGCCCG CTCGATGATC TCGGAAATTT CCGGCTCGGA AAGCTATATT CATCTCGACT ATGCCGGGGA GCGCTGGGTG ATGCTGGAGC ATGGCATTCA CGATATCGAA CCGGGCCGCG ACGTGCAGGT CCATCTCGAT ACCCGTCACC TGATGGCCTT CGATGCCAGT GGCCGGGCGC TTGCCGAATA TCTGGCCGGA CAGCTTGAAG CGCAGGGGGA ATAG
|
Protein sequence | MLELRNLSKV VAGDVHIHPV NLTLQRGSLN VLLGPTLSGK TSLMRLMAGL DKPTSGSLLF DGKDVTGLRV QDRSVAMVYQ QFINYPALSV YENIASPLRV RKVDRATIDR EVKKAAELLK LTPYLERTPL NLSGGQQQRT ALARAIVKQA SLVLLDEPLA NLDYKLREEL REELPKIFAE LGAIFVYATT EPSEALLLGG HTATLSEGRV TQYGPTIDVY RRPADLKTAR TFADPPLNTV QAIRREGHFM IGGIPVLTVP RHLAHVPEEP LTLGFHPHHL SLAGASSSEG VAPLVARSMI SEISGSESYI HLDYAGERWV MLEHGIHDIE PGRDVQVHLD TRHLMAFDAS GRALAEYLAG QLEAQGE
|
| |