Gene Avi_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0091 
Symbol 
ID7388274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp89617 
End bp90018 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content54% 
IMG OID643649830 
Producthypothetical protein 
Protein accessionYP_002548048 
Protein GI222147091 
COG category[S] Function unknown 
COG ID[COG4852] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGCT ATGCAATTGC CTATTGTGCC ACGGCTGCGG TGTTTTTCAC CTTGGATTTC 
CTCTGGCTTA GCAAAATTGC GCTGGGTTTT TACAAGTCCC GCATCGGTGA TATGATGCGG
GATCAGCCCA ATTTCACCGC TGCGGGCCTG TTCTATCTAT TTTATATCGT CGGCATTGTT
TATTTTGCGG TCGGTCCAGC CCTGCAAAGC GGCAGCCTGT TAACGGCTCT GGTCAGCGGT
GCCCTTCTGG GGCTGATCGC CTATGGCACC TATGACATGA CCAATCTGGC CACCTTGAAA
TCCTGGTCAC TGACGCTCAG TCTGGTCGAC ATGGCCTGGG GCACGGTACT GACCGCCACC
GCAGCCGGGA TTGGCTATCT GATTACCAGC CGGTTCGTAT AA
 
Protein sequence
MRSYAIAYCA TAAVFFTLDF LWLSKIALGF YKSRIGDMMR DQPNFTAAGL FYLFYIVGIV 
YFAVGPALQS GSLLTALVSG ALLGLIAYGT YDMTNLATLK SWSLTLSLVD MAWGTVLTAT
AAGIGYLITS RFV