Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0088 |
Symbol | |
ID | 7388271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 86725 |
End bp | 88032 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643649827 |
Product | amine oxidase flavin-containing |
Protein accession | YP_002548045 |
Protein GI | 222147088 |
COG category | [R] General function prediction only |
COG ID | [COG2907] Predicted NAD/FAD-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGGAT CGGGAATTTC CGGTCTATCC TGCGCATGGC TTTTGTCCAA GGGTTTCGAT GTAACGGTGT TTGAGGCTGA AAACCGCTTC GGTGGTCACG CCAATACCGT CAACGTCGCA GGACCAAACG GACCTGTAGC TGTTGATACC GGGTTCATCG TCTATAACGA CCGTAATTAT CCAAATCTCG TTGCCCTGTT CGATCATCTC GGCGTGCCAA ACCAAGCCTC CGACATGTCC TTTGCAGCCT CGCTGGATGC GGGCCGTTTC GAATATTCCG GCTGCGGGCT GGCGGGTTTG CTCGGTCAGC GCAGCAACGT GCTTCGCCCG CGCTTCTGGC GCATGGTAGC TGACATAATG CGCTTTTACC GGGAAGCGCC TTTGCTGCTC GAGCGCCAAG ACCTGACAGC GGCAACGCTT GGCGATTATC TCGATCTTGA AGCCTATAGC AATGCGTTTA TCGAGGATCA CCTCCTGCCG ATGGGCGCTG CGATCTGGTC GACGACGGCT GCCGACATGC GGGCCTATCC GCTGAATGCC TTTGTCCGGT TCTTCATCAA TCACGGTTTG GTCACGTTGA AAAACAGGCC GCAATGGCGC ACGGTGACCG GGGGCAGTCG TGAATATGTC CTGCGCATAA AGCAGGCGAC CAAGGCCGAT TTCCGGGCCA ACGATCCGGT CAAGGCCATT ATTCGCAGTG CGCTGGGGGT GAAGATCGTC ACGCAAAGCG GCTATCAGGA TCGTTTCGAT CAGGTTGTTG TCGCCACCCA TGCGGATGAA GCACTGGCGC TGCTGGACGA TGCGCAAGGG CTGGAACGGG CGCTGCTTGG CTGCTTCGAT TACACCAAAA ATGTTGCCGT GCTGCATTCC GACACCCGAC TGATGCCAAA GCGCAAACAG GTCTGGGCCA GCTGGAATTA CATCGGCGAA GAGCGCAAGG CTGGCGAAGG GCCGCTGTGC GTAACCTATT GGATGAACCG GTTACAGGGC CTCGACGCCT CGCTGCCTCT GTTCGTAACG CTCAATCCTT CGCGCGACAT CGACGAGTCC AAAGTGCATC AGGTCTTCAA CTACGCCCAT CCGCTTTTCG ATGCCAAGGC CATTGCAGCC CAGCGCCAGC TCTGGCAATT GCAGGGACGC AACAGGACGT GGTTCTGCGG TGCGCATTTT GGTAGCGGCT TCCATGAGGA CGGCCTTCAA TCCGGTCTGG CTGTTGCCGA ACAACTGTCA GGAATTGCCC GTCCGTGGTC GGTGGAAAAC CAATCAGGCC GGATTTTTGT CGAACCGATG CTGGCGGCAG CGCAATGA
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Protein sequence | MVGSGISGLS CAWLLSKGFD VTVFEAENRF GGHANTVNVA GPNGPVAVDT GFIVYNDRNY PNLVALFDHL GVPNQASDMS FAASLDAGRF EYSGCGLAGL LGQRSNVLRP RFWRMVADIM RFYREAPLLL ERQDLTAATL GDYLDLEAYS NAFIEDHLLP MGAAIWSTTA ADMRAYPLNA FVRFFINHGL VTLKNRPQWR TVTGGSREYV LRIKQATKAD FRANDPVKAI IRSALGVKIV TQSGYQDRFD QVVVATHADE ALALLDDAQG LERALLGCFD YTKNVAVLHS DTRLMPKRKQ VWASWNYIGE ERKAGEGPLC VTYWMNRLQG LDASLPLFVT LNPSRDIDES KVHQVFNYAH PLFDAKAIAA QRQLWQLQGR NRTWFCGAHF GSGFHEDGLQ SGLAVAEQLS GIARPWSVEN QSGRIFVEPM LAAAQ
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