Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0085 |
Symbol | idnO |
ID | 7388268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 83874 |
End bp | 84644 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643649824 |
Product | gluconate 5-dehydrogenase |
Protein accession | YP_002548042 |
Protein GI | 222147085 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCATGT CATCCTCGCC GCGCGCCAGG GTCGCCTGGA TCACCGGCGC CAGTTCCGGT ATTGGCCGCT CGCTTGCGCT GAAACTGGCG CGTGAAGGCT ATATCGTCGG GGTCAGCGCC CGGCGGACCG AGGATCTGAT GGCGCTGGCG GCTGAAAATC CGGACCGTAT CCATGCTTTT CCACTGGATA TTACCGATGG AAACGCTGTC AAACAGGTGG TGGGCGACAT CGAAGCCAAG CTTGGCCCGA TCGATATGGC GGTGTTTTCC GCAGGCTCCT ATATCCGTGA AACGGCCGAG CGTTTCGATG CCGAGCAATT GCGCCGGATG GTTGATCTCA ATCTGGTCGG CACCGGCCAT TGCCTGGAAG CAGTGATTGC CGTGATGGTG GCGCGCGGCA AAGGCCGGAT CGGCCTTGTC GGTTCGGTCT CCGGCTATAG CGGCCTGCCG GGCGGTGGCA TTTACGGAGC GACCAAATCA GCGATGATCA CCCTGGCTGA GGCCTTGCGT CCTGGACTTC TCGAAAAGGG CGTGGTGATC AGCATTATCA ATCCGGGCTT TGTCAAAACC CCGCTGACCG ACAAGAACGA CTTCCCCATG CCCTTCCTGG TGACGGCTGA GCAAGCTGCT GATCACATTG AAAAAGGGAT GGAGGCCGGA AAATTTGAAA TCGCCTTTCC CTGGCAAATG GTGTTGTCGC TCAAGCTTTT GAGACTTTTG CCTTATCCGC TGTATTTCGC GTTGACGCGC AAGATGCTGC GGAAGACCTG A
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Protein sequence | MVMSSSPRAR VAWITGASSG IGRSLALKLA REGYIVGVSA RRTEDLMALA AENPDRIHAF PLDITDGNAV KQVVGDIEAK LGPIDMAVFS AGSYIRETAE RFDAEQLRRM VDLNLVGTGH CLEAVIAVMV ARGKGRIGLV GSVSGYSGLP GGGIYGATKS AMITLAEALR PGLLEKGVVI SIINPGFVKT PLTDKNDFPM PFLVTAEQAA DHIEKGMEAG KFEIAFPWQM VLSLKLLRLL PYPLYFALTR KMLRKT
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