Gene Avi_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0078 
SymboliolE 
ID7388261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp79500 
End bp80402 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content57% 
IMG OID643649817 
Producthypothetical protein 
Protein accessionYP_002548035 
Protein GI222147078 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTCT ACGGAACCAA CCCGATTGCA TGGTCCAATG ACGATGACCG CACGCTGGGT 
GCCCATATCA GCCTCGACCA ATGCCTTGAT GAAACATCGA AAATCGGTTT TGACGGCATT
GAAAAGGGCC ACAAGTTTCC GCAGGAACCA GCGGCTCTGA GGGCTGTGTT GGAGCCTCGC
GGGCTTCGCT ACGTCTCCGG CTGGCATTCG CTGAACCTGC TGACCAATTC CATTGAAGAC
GAAAAGGCGG CGATGCAGCC TGCCCTCGAT CTGTTGAAGG CCATGGGCAG CAAGGTGATC
ATCGTGTGTG AAACATCGAA TGCGATCCAT GGCGATGATG GCAAGCCGGT GAATGATCGC
CCGAAACTAG CGGATTCTGA GTGGGCAGCG TTTGGCGCAG GCGTGGAAGC CTTGGCCGAA
TTTGCGGCGG CTCAGGGCAT TGCTCTGGTC TATCACCACC ACATGGGTAC GATTGTCGAG
AGCGAAGAGG AAATCGACAA GCTGATGGCC AACACCGGCC CGCACGCCAA GCTGCTGCTG
GATACCGGCC ATTGCCTGTT TGGCGGCGGC AACCCGGAGC GGGTGGCAAC CAACTATATG
AGCCGCGTGG GCCATATCCA TGCCAAGAAC ATCCGCCCCG TCATTGCCAA GCAGGTGCGC
GATGAAAAGC TCTCCTTCCT TGAAGGCGTG CGTCGTGGCG TTTTCACAGT TCCGGGCGAT
AGCGAAGGTG GCGTGAATTT TCCGCCCGTA CTGAAAATTG CTGGTGAACA TGGTTATCAG
GGTTGGCTGG TGATTGAGGC CGAGCAGGAC CCGGATGTGC GCAATCCCTA TGATTACCAG
AGCTTGGGCC TTGCTTCGTT GAAGGCCATG GCCAAGGCTG CGGGGTTGGA TAAGGCGGCT
TAA
 
Protein sequence
MILYGTNPIA WSNDDDRTLG AHISLDQCLD ETSKIGFDGI EKGHKFPQEP AALRAVLEPR 
GLRYVSGWHS LNLLTNSIED EKAAMQPALD LLKAMGSKVI IVCETSNAIH GDDGKPVNDR
PKLADSEWAA FGAGVEALAE FAAAQGIALV YHHHMGTIVE SEEEIDKLMA NTGPHAKLLL
DTGHCLFGGG NPERVATNYM SRVGHIHAKN IRPVIAKQVR DEKLSFLEGV RRGVFTVPGD
SEGGVNFPPV LKIAGEHGYQ GWLVIEAEQD PDVRNPYDYQ SLGLASLKAM AKAAGLDKAA