Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0078 |
Symbol | iolE |
ID | 7388261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 79500 |
End bp | 80402 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649817 |
Product | hypothetical protein |
Protein accession | YP_002548035 |
Protein GI | 222147078 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCTCT ACGGAACCAA CCCGATTGCA TGGTCCAATG ACGATGACCG CACGCTGGGT GCCCATATCA GCCTCGACCA ATGCCTTGAT GAAACATCGA AAATCGGTTT TGACGGCATT GAAAAGGGCC ACAAGTTTCC GCAGGAACCA GCGGCTCTGA GGGCTGTGTT GGAGCCTCGC GGGCTTCGCT ACGTCTCCGG CTGGCATTCG CTGAACCTGC TGACCAATTC CATTGAAGAC GAAAAGGCGG CGATGCAGCC TGCCCTCGAT CTGTTGAAGG CCATGGGCAG CAAGGTGATC ATCGTGTGTG AAACATCGAA TGCGATCCAT GGCGATGATG GCAAGCCGGT GAATGATCGC CCGAAACTAG CGGATTCTGA GTGGGCAGCG TTTGGCGCAG GCGTGGAAGC CTTGGCCGAA TTTGCGGCGG CTCAGGGCAT TGCTCTGGTC TATCACCACC ACATGGGTAC GATTGTCGAG AGCGAAGAGG AAATCGACAA GCTGATGGCC AACACCGGCC CGCACGCCAA GCTGCTGCTG GATACCGGCC ATTGCCTGTT TGGCGGCGGC AACCCGGAGC GGGTGGCAAC CAACTATATG AGCCGCGTGG GCCATATCCA TGCCAAGAAC ATCCGCCCCG TCATTGCCAA GCAGGTGCGC GATGAAAAGC TCTCCTTCCT TGAAGGCGTG CGTCGTGGCG TTTTCACAGT TCCGGGCGAT AGCGAAGGTG GCGTGAATTT TCCGCCCGTA CTGAAAATTG CTGGTGAACA TGGTTATCAG GGTTGGCTGG TGATTGAGGC CGAGCAGGAC CCGGATGTGC GCAATCCCTA TGATTACCAG AGCTTGGGCC TTGCTTCGTT GAAGGCCATG GCCAAGGCTG CGGGGTTGGA TAAGGCGGCT TAA
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Protein sequence | MILYGTNPIA WSNDDDRTLG AHISLDQCLD ETSKIGFDGI EKGHKFPQEP AALRAVLEPR GLRYVSGWHS LNLLTNSIED EKAAMQPALD LLKAMGSKVI IVCETSNAIH GDDGKPVNDR PKLADSEWAA FGAGVEALAE FAAAQGIALV YHHHMGTIVE SEEEIDKLMA NTGPHAKLLL DTGHCLFGGG NPERVATNYM SRVGHIHAKN IRPVIAKQVR DEKLSFLEGV RRGVFTVPGD SEGGVNFPPV LKIAGEHGYQ GWLVIEAEQD PDVRNPYDYQ SLGLASLKAM AKAAGLDKAA
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