| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0075 |
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| Symbol | |
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| ID | 7388838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 74678 |
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| End bp | 75511 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643649814 |
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| Product | transcriptional regulator RpiR family |
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| Protein accession | YP_002548032 |
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| Protein GI | 222147075 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA TCACCGTTGC CGAGACCTCC GCGCCCGATA CCATCAAAGC GTTTGAAGAA
CGGCTGATGC AGGTGTCTGA CACCTTGCCA AAAAGGCTGA AGCAATGTGC GGATTATGTC
GGCGCCAATA AGGACCGCAT CGCGGTTTCC ACCGTGGCCG AAATGGCGGA AGGTGCTGGC
GTGCAGCCCT CTGCCTTTAT GCGATTTTGC CAAATATTTG GTTTTTCTGG ATTTTCCGAG
ATGCAAAAGC TGTTTCGGGA CTCTCTTGTC GGCGGTTGGC CGGATTATTC TACCCGTCTG
CATCATTTGC GCGAAACGGC ATCGGGCAGC CCATCGGCGC TTTTGGCGGA ATTTGTCGAG
GCGGGGCGTG TTTCGCTGGA AGGATTGCTG CAAACGGTCG ATCCGCAACT GTTAGAACAG
GCTGTGGCTT GCCTCAGCAC GGCTGGAATG ATCCATATTG TTGGCTTGCG CCGCTCTTTT
CCGGTGGCAA GCTATATTGC CTATGCCTTT GAAAAAATGG CAGTTCCGGC CATGTTACAC
AGTGGCGTTG GCAAATTGGA AAGCCAGCAT GCCATCCGCG ATGGTGATGT GGTGCTGGCC
ATTACCTTTG CGCCCTATTC GACCGAGACG CTGGATTTGG TTGAGCAGGT TTCAGCGCGG
GGCATTTCCG TGGTGGCGAT TACCGATACG GTGGTCAATC CGCTGCGCAA ACTGGGGACA
ATAACCCTCT CAGTCGCCGA GGTGGATTTT GGCGCATTTC GCTCACTCTC TGCCACGCTC
TGTCTGGCCA TTGCGCTCTC GGTTGCGGTG GGAACGGCCC GACAACAGGA CTGA
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| Protein sequence | MTDITVAETS APDTIKAFEE RLMQVSDTLP KRLKQCADYV GANKDRIAVS TVAEMAEGAG
VQPSAFMRFC QIFGFSGFSE MQKLFRDSLV GGWPDYSTRL HHLRETASGS PSALLAEFVE
AGRVSLEGLL QTVDPQLLEQ AVACLSTAGM IHIVGLRRSF PVASYIAYAF EKMAVPAMLH
SGVGKLESQH AIRDGDVVLA ITFAPYSTET LDLVEQVSAR GISVVAITDT VVNPLRKLGT
ITLSVAEVDF GAFRSLSATL CLAIALSVAV GTARQQD
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