Gene Avi_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0073 
Symbol 
ID7389063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp72244 
End bp73248 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content58% 
IMG OID643649812 
Producthypothetical protein 
Protein accessionYP_002548030 
Protein GI222147073 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTCA CTCCCAATTT TTTCAAATTC ATCAGGCTTC TCTCCGTCTT CGCTTTATCA 
TCGGCCTCTT CCCTGGCTAT GGCCGCAGAA GGACCATCAC GCCTTCCAGA CTGGCTGAAA
GACCACGTGG GGGAAGGAAC CGGCCAGATC GCCCCTGTCG TCCTGGAGAG GGCGCGTGCG
CTCTATCTCG CTAGAGTGGC GGAAGGCAAA ATCAGCAACG CATGTTATTT CGCGATGGAT
GCCACCCGGC CAAACGACCG TACTGACGGC GCCTCCGGAG GCCGCTTCTA TGTCATCTGT
GAAGCGGAGC GATCCTTCCG GGTCATATCA GCGGGACACG GCGGCGGGCG CAACCTCGGA
GGCGCCGTCA ATTTCTCAAA CGGGCGAGAA TGCGCCAAGA ACTTTGGTAA CGCCCTGGAT
TCAAACCTGA CGGCGGGCGG CGCTTACATG ACGAGCGAAA TCAAGACGAC GTTCAAAGGC
TACTACCGCA CCTCTGCCAA TCAGGAATCT TTCCTGACGC GGTCTTTCGT ACAGTTCGAT
GGAACCGGTG AGACCGCCAA TGCCCGCCAA CGCGCAATTG GCGGGCATGC GGCGGCATTG
GTCTCGGGAA TTTGCATGCT GAAAAAGCCT GACAGCACCT ATGCCAATCG AGACGGCTAT
GTCCCACGCG GTAATCTCGT CACCTACCCC GCTGGCCGCA GTGACGGTTG CACAAGTTGG
TCTCCGGACG ACGCGCCCCA AGTCCTGTCA CTGGTCAAGG ATAACCCGAC GACCCTCTAC
ATCTACCCTG AGTCGCGAGA CATCAACGCA GTTTCCCGGG ACTTGGCGGC AGGCCGATCC
TCTTCAGGGA ATAAAACCTA TTGGAACAAC GCCTGCCTGA AGGAAATTGG CTCCCCGCAG
TTCTGGCCTA AGGAAAAGCT CGAGCCGATT ATCGCTCAAT ACAAGCAGGA TCATCCCGCA
CCGCCTCCGC GCCCAATCCC GATCTGCGAC GTGCCGTCTC ATTGA
 
Protein sequence
MKFTPNFFKF IRLLSVFALS SASSLAMAAE GPSRLPDWLK DHVGEGTGQI APVVLERARA 
LYLARVAEGK ISNACYFAMD ATRPNDRTDG ASGGRFYVIC EAERSFRVIS AGHGGGRNLG
GAVNFSNGRE CAKNFGNALD SNLTAGGAYM TSEIKTTFKG YYRTSANQES FLTRSFVQFD
GTGETANARQ RAIGGHAAAL VSGICMLKKP DSTYANRDGY VPRGNLVTYP AGRSDGCTSW
SPDDAPQVLS LVKDNPTTLY IYPESRDINA VSRDLAAGRS SSGNKTYWNN ACLKEIGSPQ
FWPKEKLEPI IAQYKQDHPA PPPRPIPICD VPSH