| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0064 |
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| Symbol | actS |
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| ID | 7389056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 56244 |
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| End bp | 57548 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649800 |
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| Product | two component sensor kinase |
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| Protein accession | YP_002548024 |
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| Protein GI | 222147067 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0839262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA AGACGGATAT TCGCATGCAT TTTGGTACAT CCAGCCGCAG ATTGCGGCTT
GAAACGCTTG TCCGGCTTCG CTGGCTGGCG GTCGCAGGGC AGACCATCAC CCTGGCAATT
GTCGCGCTGG TTCTGCAATT TCCGATGCCG GTACTGGCCG CCGCCATTCT GATCGGCGCA
TTGGCAGTGG TGAATTTCCT GCTGCAACTG GCCTTTCCGT CCACCCAGAG GCTGGAACCG
ATTTGGACAC TGGCGATTTT GGCGCTGGAT CTCTGCCAGA TGGGCGCTCT GCTGTTTATC
ACCGGCGGGC TGGCCAATCC CTTCGCGCCG CTGATCTGCG TACCGGTCAT CGTGGTTTTT
GCCTCCCAGC CGCTGCGCCA TTCCATGGCC TTGCTGGGCC TGGCGATGGT CTGCATTTCG
GTTCAGGCTT TCACGCCTTT TCCCCTGCCC TGGTATGCCG ACTATATTGA TCGCGGCGGC
CCGGTCATGC TGGTGGCAAT CTGGTGCTCG ATCGTGTCGA TGACCGCCTT TGCTGCCTTC
TATGCCTATC GGGTGTCCAA GGAGGCCAAT CTTCTGGCCG ATGCGCTGGC GGCAACCGAA
TTGGTGCTGC AAAAGGAAAA GCATCTTTCC CAGCTGGATG GGCTGGCCGC GGCCGCCGCC
CATGAATTGG GGACACCTCT GGCGACGATC AGCGTCGTTG CCAAGGAAAT GGAACGGGAA
TTGGGCAAGG ACCCACGCTT CGGCGAGGAC GTCCAGCTGC TGCGCAGCCA GAGCGAACGT
TGCCGCGACA TTCTGAAGCG TCTGACAACT CTGTCCGCCG AGGATGAGGC GCATATGCGG
CAATTGCCGC TCTCGTCGCT GATTGAGGAA GTGATCGCGC CTCACCGGGA CTTCGGCATC
AAGCTGACGG TGGTGGAGGT TTCCGAACGC GCCAGCGAGC CGGTGGGTAA CCGTAATCCC
GGCATTCTCT ACGGGCTTGG CAACCTGATC GAAAACGCCC TGGACTATGC TCGGGATCAG
GTAACCATCA CGGTAGAGCA TGACAACCGT CATGTGACGA TCATCATTGA GGACGATGGA
GAAGGCTTTG CGCCCGATAT CCTTCTGAGA ATCGGCGAGC CTTATGTCAC CAGCCGCAAA
AGCGATGCGC GGGCGGGCGG ACTTGGGCTG GGGTTGTTCA TTGCCAAGAC CTTGCTGGAG
CGTTCCGGCG CTGTCCTGAC CTTTGAAAAT CGGGGCACCT CCAGCCCGGG GGCGCGGGTA
ACGGTGCGCT GGCCGCGCCG GGAAATGGAA ACACCGACAA AGTGA
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| Protein sequence | MSAKTDIRMH FGTSSRRLRL ETLVRLRWLA VAGQTITLAI VALVLQFPMP VLAAAILIGA
LAVVNFLLQL AFPSTQRLEP IWTLAILALD LCQMGALLFI TGGLANPFAP LICVPVIVVF
ASQPLRHSMA LLGLAMVCIS VQAFTPFPLP WYADYIDRGG PVMLVAIWCS IVSMTAFAAF
YAYRVSKEAN LLADALAATE LVLQKEKHLS QLDGLAAAAA HELGTPLATI SVVAKEMERE
LGKDPRFGED VQLLRSQSER CRDILKRLTT LSAEDEAHMR QLPLSSLIEE VIAPHRDFGI
KLTVVEVSER ASEPVGNRNP GILYGLGNLI ENALDYARDQ VTITVEHDNR HVTIIIEDDG
EGFAPDILLR IGEPYVTSRK SDARAGGLGL GLFIAKTLLE RSGAVLTFEN RGTSSPGARV
TVRWPRREME TPTK
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