Gene Avi_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0061 
Symbol 
ID7389053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp54130 
End bp54828 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content59% 
IMG OID643649797 
Producthypothetical protein 
Protein accessionYP_002548021 
Protein GI222147064 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATCC GCAATGCACT GACCGTGCTC GGTCTATTCT CCACCCTCGC CATCACTGGC 
TGCTCCACCA CGTCGGAAGC CGACAGCAAA AAGACCGCTG AGGCCGCGCC TGTTGTCGCG
CCAGCCTCGG TCGAAACAGC ACAGATCTTC GATGATTCCT ATGGTCCGGT TACGGATGCT
GGCTATGCGC TGCCAGGCAT TCCGATCCAG AAGGTCAACC CGAAGTTCCG CCGTCAGATC
ATTGCTTTCG ACACCACAGA GCGGCCCGGT ACGATCATCG TCAACACCAA GGAACGCTTC
CTGTATTACG TTCTGCCGAA TGGCAAGGCG ATCCGCTACG GAATCGGCGT CGGCAAGGAC
GGCTTCGCCT GGCAGGGTCA GGCCTATATT GCTTGGAAAC AGGAATGGCC AACCTGGCAT
CCGCCGAAGG AAATGGCCGT GCGCAAGCCG GAAGTCGCCA AATATGTTGA AAACGGCATG
GGCCCCAGCA TCAGCAATCC GCTTGGCGCC CGTGCCATGT ATCTGTTCAA CGACAAGGGC
CAGGATACGC TGTTCCGTAT CCACGGTTCG CCGGAATGGG CATCGATCGG CACCGCCGCA
TCGTCTGGCT GCATCCGCAT GATCAACCAG GACGTCATCG ACCTCTACAG CCGCGTCCTG
CCGGGCAAGG CCACCAAGGT CATCGTTCAG CAGTCTTAA
 
Protein sequence
MRIRNALTVL GLFSTLAITG CSTTSEADSK KTAEAAPVVA PASVETAQIF DDSYGPVTDA 
GYALPGIPIQ KVNPKFRRQI IAFDTTERPG TIIVNTKERF LYYVLPNGKA IRYGIGVGKD
GFAWQGQAYI AWKQEWPTWH PPKEMAVRKP EVAKYVENGM GPSISNPLGA RAMYLFNDKG
QDTLFRIHGS PEWASIGTAA SSGCIRMINQ DVIDLYSRVL PGKATKVIVQ QS