Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0061 |
Symbol | |
ID | 7389053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 54130 |
End bp | 54828 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649797 |
Product | hypothetical protein |
Protein accession | YP_002548021 |
Protein GI | 222147064 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATCC GCAATGCACT GACCGTGCTC GGTCTATTCT CCACCCTCGC CATCACTGGC TGCTCCACCA CGTCGGAAGC CGACAGCAAA AAGACCGCTG AGGCCGCGCC TGTTGTCGCG CCAGCCTCGG TCGAAACAGC ACAGATCTTC GATGATTCCT ATGGTCCGGT TACGGATGCT GGCTATGCGC TGCCAGGCAT TCCGATCCAG AAGGTCAACC CGAAGTTCCG CCGTCAGATC ATTGCTTTCG ACACCACAGA GCGGCCCGGT ACGATCATCG TCAACACCAA GGAACGCTTC CTGTATTACG TTCTGCCGAA TGGCAAGGCG ATCCGCTACG GAATCGGCGT CGGCAAGGAC GGCTTCGCCT GGCAGGGTCA GGCCTATATT GCTTGGAAAC AGGAATGGCC AACCTGGCAT CCGCCGAAGG AAATGGCCGT GCGCAAGCCG GAAGTCGCCA AATATGTTGA AAACGGCATG GGCCCCAGCA TCAGCAATCC GCTTGGCGCC CGTGCCATGT ATCTGTTCAA CGACAAGGGC CAGGATACGC TGTTCCGTAT CCACGGTTCG CCGGAATGGG CATCGATCGG CACCGCCGCA TCGTCTGGCT GCATCCGCAT GATCAACCAG GACGTCATCG ACCTCTACAG CCGCGTCCTG CCGGGCAAGG CCACCAAGGT CATCGTTCAG CAGTCTTAA
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Protein sequence | MRIRNALTVL GLFSTLAITG CSTTSEADSK KTAEAAPVVA PASVETAQIF DDSYGPVTDA GYALPGIPIQ KVNPKFRRQI IAFDTTERPG TIIVNTKERF LYYVLPNGKA IRYGIGVGKD GFAWQGQAYI AWKQEWPTWH PPKEMAVRKP EVAKYVENGM GPSISNPLGA RAMYLFNDKG QDTLFRIHGS PEWASIGTAA SSGCIRMINQ DVIDLYSRVL PGKATKVIVQ QS
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