Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0057 |
Symbol | glcB |
ID | 7389052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 51760 |
End bp | 53940 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649796 |
Product | malate synthase G |
Protein accession | YP_002548020 |
Protein GI | 222147063 |
COG category | [C] Energy production and conversion |
COG ID | [COG2225] Malate synthase |
TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGTG TCGAACAGTT TGGTCTGGCT ATCGAGCAGG ATCTCTATGA TTTTCTGGTG AGCGAGGCCT TGCCGGGGAC AGGCGTGGAG CCAGAGGCCT TCTTCCAGCA TTTCTCCAGC CTCGTGCATG AGCTTGCGCC GAAGAATCGC GCCCTGCTGG CCAAGCGCGA CGCCTTTCAA GCGCAGCTGG ACAACTGGTA CAAGCAAAAC GGCGCCCCCT CGGATCTTGC GGCTTACGAA GCTTTCCTGC GCGATATCGG CTATCTCCTG CCGGAAGGGC CGGATTTTTC CGTGACGACC AGCAATGTCG ACGCGGAAAT CGCTTCGATT GCCGGGCCGC AGCTTGTCGT GCCTGTGATG AATGCCCGTT ATGCCCTGAA TGCTGCCAAT GCGCGCTGGG GTTCGCTCTA CGACGCGCTC TACGGAACGG ATGCGATCTC CGAGGCCGAC GGTGCCGAAA AGGGCAGGGG GTATAATCCC AAACGTGGCG AAAAGGTTAT TGCCTGGGCG CGGGCTTTCC TCGATCAGTC CGTGCCTCTG GCGGGTGGCC GCTGGGCGGA TGTGGCGGGC CTTGCGCTGA CTGATGGCTA TCTTGATGTA ACGCTGGCCT CCGGCGACAA GACCGGGTTG ATGGACCCCT CGCAACTGGC GGGGACCTTC AGCGAGGATG GCAGCGTGAC CTCCTATCTT CTGCGCCGCA ACGGTCTGCA TGTGGAAATC TGCATTGACG CCAAAGGTGC GATTGGTGCT GCCGATAAGG CGAATATCAA TGATATCAGA ATGGAATCGG CGATTACCGC TATCATGGAC TGCGAGGATT CGGTTGCCGC CGTCGATGCT GAGGACAAGA TCCTGGCCTA TTCCAACTGG CTCGGCTTGA TGAAGGGCGA TCTGGAGGAA GTGGTTACCA AGGGCGATCA CGTCTTTACC CGTACCCTCA ATCCTGATCT CGAATTCACC GATCCGCAGG GCAAGCCCTT TACCGTCGCC AGCCGGTCAC TGATGCTGAT TCGCAATGTC GGGCATCTGA TGACCAATCC GGCCATTCTG GATCGTGACG GTGCCGAGGT GCCGGAAGGC ATTATGGATG CGATGGTGAC CGCGGTGATC GCGCTGCATG ATATCGGACC GAATGGACGG CGGAAGAATT CGCGCCGGGG CTCAATGTAT GTGGTGAAGC CGAAAATGCA TGGGCCGGAA GAAGTGGCTT TTGCCGTCGA AATTTTTACC CGTGTCGAAC AGGCGCTGGG CATGGAACCC AATACGATCA AGATGGGCAT TATGGATGAG GAGCGCCGTA CCACGGTTAA CCTCAAGGAA TGCATCCGCG CCGCCAAGGA CCGGGTGGTG TTCATCAATA CCGGCTTCCT CGACCGCACT GGCGACGAAA TCCATACCTC GATGGAAGCC GGGCCGATGA TTCGCAAGGG TGACATGAAA CAGGCCGCCT GGATTGCGGC TTATGAAAAC TGGAACGTCG ATATCGGTCT GCAATGCGGC CTGTCCGGCC ATGCCCAGAT TGGCAAGGGC ATGTGGGCCA TGCCGGACCT GATGGCGGCG ATGTTGGAAC AGAAGATCGC TCATCCGAAA GCCGGGGCCA ATACTGCCTG GGTCCCATCA CCAACGGCAG CTACGCTGCA TGCCACCCAT TATCATCAGG TGGATGTCGC GGGCGTCCAG GCCGGATTGA AGAGCCGGAC GCGGGCCAAG CTCTCCGATA TCTTGTCGGT GCCGGTGGCC TCCCGCCCCA ATTGGACGCC GGAAGAAATC CAGCGCGAGC TGGATAACAA TGCCCAGGGC ATTCTGGGCT ATGTGGTCCG CTGGATCGAC CAGGGCATCG GCTGCTCGAA AGTGCCTGAC ATTAACAATG TCGGGCTGAT GGAAGACCGG GCGACCCTGC GCATCTCCGC CCAACACATG GCCAACTGGC TGCATCATGG CGTTGTCACC GAGGCGCAGG TGATCGAAAC ACTCAAACGG ATGGCAGCCA TCGTCGATCA GCAGAATGCG GGTGATTCGG CCTATCGCCC GATGGCTGCC GATTTCGACA CCTCCATCGC TTTCCAGGCG GCACTCGATC TGGTGTTGAA GGGCAGGGAG CAGCCGAACG GTTATACCGA ACCGGTCCTG CACCGCCGCC GACTTGAGTT GAAGGCCACA GCAATTCCAG CAAAAGTGTG A
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Protein sequence | MARVEQFGLA IEQDLYDFLV SEALPGTGVE PEAFFQHFSS LVHELAPKNR ALLAKRDAFQ AQLDNWYKQN GAPSDLAAYE AFLRDIGYLL PEGPDFSVTT SNVDAEIASI AGPQLVVPVM NARYALNAAN ARWGSLYDAL YGTDAISEAD GAEKGRGYNP KRGEKVIAWA RAFLDQSVPL AGGRWADVAG LALTDGYLDV TLASGDKTGL MDPSQLAGTF SEDGSVTSYL LRRNGLHVEI CIDAKGAIGA ADKANINDIR MESAITAIMD CEDSVAAVDA EDKILAYSNW LGLMKGDLEE VVTKGDHVFT RTLNPDLEFT DPQGKPFTVA SRSLMLIRNV GHLMTNPAIL DRDGAEVPEG IMDAMVTAVI ALHDIGPNGR RKNSRRGSMY VVKPKMHGPE EVAFAVEIFT RVEQALGMEP NTIKMGIMDE ERRTTVNLKE CIRAAKDRVV FINTGFLDRT GDEIHTSMEA GPMIRKGDMK QAAWIAAYEN WNVDIGLQCG LSGHAQIGKG MWAMPDLMAA MLEQKIAHPK AGANTAWVPS PTAATLHATH YHQVDVAGVQ AGLKSRTRAK LSDILSVPVA SRPNWTPEEI QRELDNNAQG ILGYVVRWID QGIGCSKVPD INNVGLMEDR ATLRISAQHM ANWLHHGVVT EAQVIETLKR MAAIVDQQNA GDSAYRPMAA DFDTSIAFQA ALDLVLKGRE QPNGYTEPVL HRRRLELKAT AIPAKV
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