Gene Avi_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0050 
Symbol 
ID7389047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp39579 
End bp42314 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content59% 
IMG OID643649791 
Producttwo component sensor kinase 
Protein accessionYP_002548015 
Protein GI222147058 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCAC CCTCGGGTGA TGCATTCGGC ATGTGCACAC GCGAAATGGG GATGTCTTGT 
CGGAATTGCG GCACAGTGGA CGGAGACAGA CCGGAAATGA CGGTTCAGAA GAAATACCCG
TTCCTACGGG GAAGGACGGG CCTACGGGGA AGGACGGGCC TACGCGGAAG TGCGGGTAAA
ACCATGCGCG CCGAATCTGC GTCCTTCGGG GACACAGGAC CTCGCGCTGG CGCGGCCAGC
GGCATCGCCG GACGTGGCTT CCTGCGTTTA TCGCGCTGGT GGCTGCACGG GAGCACGGTT
CTTGCTGGTG GGCTCGTGTG CCATTCTGCC CTAGCGCAAA CGATTGCCGT GCCGCAGCTG
AATGCGGGCG GCATCGGCAC GTTTTCATCC ACTGAAATGA TTGGCCTTTC CCTAGTAATC
GGCGCGATTT CCGCGACGCT TCTGTCCACC CTCTGGCTGG TGCGTCAGCG CAACAGTATC
GAGGCGGACA GCCGGGAGAT ACGATCGGCC CTGTCGGATG CCAACCAGCG CATTTCCCGT
TATCAGGCGC TGATTGCCGA CAAGAACCGT CGCATCGTCA TCTGGGACGG TGGTGAAACC
AAGCCGGAAC AGCTGGGCCA ATTGCCAGTG GAAACCGGCG CACCCCAGAC CGAAGGCGAT
TTCCTGGCCT TTGGCCGCTG GATGAAGCCC GGTTCGGCCG CCGACCTGGA CAATGCCATT
GAGAAACTGC GCTTTAACGC CCAGAGCTTT GACCTGATCG TCGAGACCTA TCGCGACGAG
GTGCTGGAAG TGCAGGGCCG TGTTTCCGGG GGGCGGGCCT TTGCCCGTTT CGTGGCGCTC
AATAATCTGC GCGCCGAACT GGCCGAACTG AAAATTGAAA AGACCCGGCT CTCCACCGCC
ATCGAAACCT TCGAAAGCCT GCTGGAATCC GTCGAACAAC CCGTCTGGCA GCGCGATTCC
GAGGGGCGGC TGGTCTGGGT CAATCAGGCC TATAGCGATG CCGTTGAAGC GCTGACCCCT
GATCAGGCCA TACAGGAAGG CCGTGAAATC CTCAACACCA TTACCCGGGA AAAGATCCGG
GCGACGTTGA CGCCGGTTTC GCCCTACCAT GATACGGTTT CCACCGTTGT GCATGGCAAC
CGCACTTTCT TTTCCGTGGT TGATACCAAG ACGCCGAAGG GCTCTTGCGG CATGGCCATC
GACGTTTCGC GCGAAGAGGC CCTGCGCGAG GAGTTGAGCC GCACCCTGAA AAGCCACGCC
GAAACACTGG ATCATCTGGC AACGCCGGTG GCGATTTTCG ACGGCGAGCG GCGGCTGCAA
TTCTACAATC AGGCCTTCCA GCAGCTCTGG GATCTGGATC TCGCCTTCCT CGAATCTCGC
CCCGACCATG CCGAATTGCT GGACCGGTTG CGTAGCGCCG GCAAGTTGCC GGAACAATTG
AGCTGGAAGG CATGGAAGGA AAATACCCTT TCCGTCTATC GCTCCATCGA TACCCAGACC
GTGCTCTGGC ACCTGCCCAA CGGCCAGACC CTGCGTGTTA TCGCCTCTGC CCATCCGCAG
GGCGGCGCCA CCTGGGTGTT TGAGAACCTC ACCGAACAGG TGGATCTCGA AACCCGCTAT
AATACGCTGG TCCGGGTTCA GGGTGAAACC ATCGATCATC TGTCCGAAGG CGTTGCAGTC
TTTGGTCCCG ATGGCCGAAT CCGGCTGTCC AATCCGGCGT TCCGGGCGCT CTGGGGCATT
ACCGAGACTC AGGCCGCGCC TGGCACCCAT ATCCGCGCCA TCGAAGAAGC TTGTGCTCTT
TCCTATGAAA AGCCGGATGG CTGGCGCGCC TTCGGCAAGA TGATCACCAG TTTCGAGGAC
GAGCGGCCGT CCAGCCAAGG TACGATTGAG CTGATGTCCG GCCTGGTGCT GGATTACGCG
GTCATCCCGC TGCCCAACGC CCAGACAATG CTGACCTTCG TCAACATTAC CGATAGTGTT
CGGGCGGAAC GGGCGCTGCT TGAAAAGAAC GAAGCGCTGC GCAAGGCTGA CGAGCTGAAG
AACGATTTCG TCCAGCATAT TTCCTATGAG CTGCGCTCGC CGCTGACCAA TATTATCGGC
TTTACCGACC TGTTGAAATC GTCGGCCATT GGTCCGCTCA ATGAACGGCA GGGGGAATAT
GTCGATCATA TCTCCACCTC GTCGGCCGTG CTGCTGACCA TCGTCAACGA CATTCTCGAT
CTTGCCACAG TCGATGCCGG TATCATGCGG CTGACCTATT CGGATATCGA TCTCACCGAC
CTTCTGGACG ATGTGTCGAT GCAGATGACC GACCGGTTGC AGGAAGGCGG CGTGACGCTG
GAAATCCTTG CTCCGTCGCA TCTGGGCGAC ATTGTCGCCG ACCAGCAACG GCTGAAGCAG
ATCCTGATCA AGATCATCAC CAATGCCGTG AACTTTTCGC CCGAAGGCGC CAAGGTCGTG
TTGAAATGCT GGCGTGAAGA TGCCGACTTC GTATTTTCGG TTTCCGATAC CGGATGCGGC
ATCCCAGAAG ATATGCTGCC ATCGGTGTTC AAGCGTTTTT CCTCGAATGC CAAGGGTGGC
AAGCGCACCG GGGCTGGCCT TGGCCTGTCG ATTGTCGAAA GCTTCGTGCA TCTGCATAAC
GGCACCGTCT CGATAAACAG TGTTCCCAAC CAAGGCACCA CGGTTCTTTG CCGAATTCCG
TCCGGTGTGC TCGTCCATTC CGTCGCCGCA GAATGA
 
Protein sequence
MTSPSGDAFG MCTREMGMSC RNCGTVDGDR PEMTVQKKYP FLRGRTGLRG RTGLRGSAGK 
TMRAESASFG DTGPRAGAAS GIAGRGFLRL SRWWLHGSTV LAGGLVCHSA LAQTIAVPQL
NAGGIGTFSS TEMIGLSLVI GAISATLLST LWLVRQRNSI EADSREIRSA LSDANQRISR
YQALIADKNR RIVIWDGGET KPEQLGQLPV ETGAPQTEGD FLAFGRWMKP GSAADLDNAI
EKLRFNAQSF DLIVETYRDE VLEVQGRVSG GRAFARFVAL NNLRAELAEL KIEKTRLSTA
IETFESLLES VEQPVWQRDS EGRLVWVNQA YSDAVEALTP DQAIQEGREI LNTITREKIR
ATLTPVSPYH DTVSTVVHGN RTFFSVVDTK TPKGSCGMAI DVSREEALRE ELSRTLKSHA
ETLDHLATPV AIFDGERRLQ FYNQAFQQLW DLDLAFLESR PDHAELLDRL RSAGKLPEQL
SWKAWKENTL SVYRSIDTQT VLWHLPNGQT LRVIASAHPQ GGATWVFENL TEQVDLETRY
NTLVRVQGET IDHLSEGVAV FGPDGRIRLS NPAFRALWGI TETQAAPGTH IRAIEEACAL
SYEKPDGWRA FGKMITSFED ERPSSQGTIE LMSGLVLDYA VIPLPNAQTM LTFVNITDSV
RAERALLEKN EALRKADELK NDFVQHISYE LRSPLTNIIG FTDLLKSSAI GPLNERQGEY
VDHISTSSAV LLTIVNDILD LATVDAGIMR LTYSDIDLTD LLDDVSMQMT DRLQEGGVTL
EILAPSHLGD IVADQQRLKQ ILIKIITNAV NFSPEGAKVV LKCWREDADF VFSVSDTGCG
IPEDMLPSVF KRFSSNAKGG KRTGAGLGLS IVESFVHLHN GTVSINSVPN QGTTVLCRIP
SGVLVHSVAA E