Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0050 |
Symbol | |
ID | 7389047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 39579 |
End bp | 42314 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643649791 |
Product | two component sensor kinase |
Protein accession | YP_002548015 |
Protein GI | 222147058 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCAC CCTCGGGTGA TGCATTCGGC ATGTGCACAC GCGAAATGGG GATGTCTTGT CGGAATTGCG GCACAGTGGA CGGAGACAGA CCGGAAATGA CGGTTCAGAA GAAATACCCG TTCCTACGGG GAAGGACGGG CCTACGGGGA AGGACGGGCC TACGCGGAAG TGCGGGTAAA ACCATGCGCG CCGAATCTGC GTCCTTCGGG GACACAGGAC CTCGCGCTGG CGCGGCCAGC GGCATCGCCG GACGTGGCTT CCTGCGTTTA TCGCGCTGGT GGCTGCACGG GAGCACGGTT CTTGCTGGTG GGCTCGTGTG CCATTCTGCC CTAGCGCAAA CGATTGCCGT GCCGCAGCTG AATGCGGGCG GCATCGGCAC GTTTTCATCC ACTGAAATGA TTGGCCTTTC CCTAGTAATC GGCGCGATTT CCGCGACGCT TCTGTCCACC CTCTGGCTGG TGCGTCAGCG CAACAGTATC GAGGCGGACA GCCGGGAGAT ACGATCGGCC CTGTCGGATG CCAACCAGCG CATTTCCCGT TATCAGGCGC TGATTGCCGA CAAGAACCGT CGCATCGTCA TCTGGGACGG TGGTGAAACC AAGCCGGAAC AGCTGGGCCA ATTGCCAGTG GAAACCGGCG CACCCCAGAC CGAAGGCGAT TTCCTGGCCT TTGGCCGCTG GATGAAGCCC GGTTCGGCCG CCGACCTGGA CAATGCCATT GAGAAACTGC GCTTTAACGC CCAGAGCTTT GACCTGATCG TCGAGACCTA TCGCGACGAG GTGCTGGAAG TGCAGGGCCG TGTTTCCGGG GGGCGGGCCT TTGCCCGTTT CGTGGCGCTC AATAATCTGC GCGCCGAACT GGCCGAACTG AAAATTGAAA AGACCCGGCT CTCCACCGCC ATCGAAACCT TCGAAAGCCT GCTGGAATCC GTCGAACAAC CCGTCTGGCA GCGCGATTCC GAGGGGCGGC TGGTCTGGGT CAATCAGGCC TATAGCGATG CCGTTGAAGC GCTGACCCCT GATCAGGCCA TACAGGAAGG CCGTGAAATC CTCAACACCA TTACCCGGGA AAAGATCCGG GCGACGTTGA CGCCGGTTTC GCCCTACCAT GATACGGTTT CCACCGTTGT GCATGGCAAC CGCACTTTCT TTTCCGTGGT TGATACCAAG ACGCCGAAGG GCTCTTGCGG CATGGCCATC GACGTTTCGC GCGAAGAGGC CCTGCGCGAG GAGTTGAGCC GCACCCTGAA AAGCCACGCC GAAACACTGG ATCATCTGGC AACGCCGGTG GCGATTTTCG ACGGCGAGCG GCGGCTGCAA TTCTACAATC AGGCCTTCCA GCAGCTCTGG GATCTGGATC TCGCCTTCCT CGAATCTCGC CCCGACCATG CCGAATTGCT GGACCGGTTG CGTAGCGCCG GCAAGTTGCC GGAACAATTG AGCTGGAAGG CATGGAAGGA AAATACCCTT TCCGTCTATC GCTCCATCGA TACCCAGACC GTGCTCTGGC ACCTGCCCAA CGGCCAGACC CTGCGTGTTA TCGCCTCTGC CCATCCGCAG GGCGGCGCCA CCTGGGTGTT TGAGAACCTC ACCGAACAGG TGGATCTCGA AACCCGCTAT AATACGCTGG TCCGGGTTCA GGGTGAAACC ATCGATCATC TGTCCGAAGG CGTTGCAGTC TTTGGTCCCG ATGGCCGAAT CCGGCTGTCC AATCCGGCGT TCCGGGCGCT CTGGGGCATT ACCGAGACTC AGGCCGCGCC TGGCACCCAT ATCCGCGCCA TCGAAGAAGC TTGTGCTCTT TCCTATGAAA AGCCGGATGG CTGGCGCGCC TTCGGCAAGA TGATCACCAG TTTCGAGGAC GAGCGGCCGT CCAGCCAAGG TACGATTGAG CTGATGTCCG GCCTGGTGCT GGATTACGCG GTCATCCCGC TGCCCAACGC CCAGACAATG CTGACCTTCG TCAACATTAC CGATAGTGTT CGGGCGGAAC GGGCGCTGCT TGAAAAGAAC GAAGCGCTGC GCAAGGCTGA CGAGCTGAAG AACGATTTCG TCCAGCATAT TTCCTATGAG CTGCGCTCGC CGCTGACCAA TATTATCGGC TTTACCGACC TGTTGAAATC GTCGGCCATT GGTCCGCTCA ATGAACGGCA GGGGGAATAT GTCGATCATA TCTCCACCTC GTCGGCCGTG CTGCTGACCA TCGTCAACGA CATTCTCGAT CTTGCCACAG TCGATGCCGG TATCATGCGG CTGACCTATT CGGATATCGA TCTCACCGAC CTTCTGGACG ATGTGTCGAT GCAGATGACC GACCGGTTGC AGGAAGGCGG CGTGACGCTG GAAATCCTTG CTCCGTCGCA TCTGGGCGAC ATTGTCGCCG ACCAGCAACG GCTGAAGCAG ATCCTGATCA AGATCATCAC CAATGCCGTG AACTTTTCGC CCGAAGGCGC CAAGGTCGTG TTGAAATGCT GGCGTGAAGA TGCCGACTTC GTATTTTCGG TTTCCGATAC CGGATGCGGC ATCCCAGAAG ATATGCTGCC ATCGGTGTTC AAGCGTTTTT CCTCGAATGC CAAGGGTGGC AAGCGCACCG GGGCTGGCCT TGGCCTGTCG ATTGTCGAAA GCTTCGTGCA TCTGCATAAC GGCACCGTCT CGATAAACAG TGTTCCCAAC CAAGGCACCA CGGTTCTTTG CCGAATTCCG TCCGGTGTGC TCGTCCATTC CGTCGCCGCA GAATGA
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Protein sequence | MTSPSGDAFG MCTREMGMSC RNCGTVDGDR PEMTVQKKYP FLRGRTGLRG RTGLRGSAGK TMRAESASFG DTGPRAGAAS GIAGRGFLRL SRWWLHGSTV LAGGLVCHSA LAQTIAVPQL NAGGIGTFSS TEMIGLSLVI GAISATLLST LWLVRQRNSI EADSREIRSA LSDANQRISR YQALIADKNR RIVIWDGGET KPEQLGQLPV ETGAPQTEGD FLAFGRWMKP GSAADLDNAI EKLRFNAQSF DLIVETYRDE VLEVQGRVSG GRAFARFVAL NNLRAELAEL KIEKTRLSTA IETFESLLES VEQPVWQRDS EGRLVWVNQA YSDAVEALTP DQAIQEGREI LNTITREKIR ATLTPVSPYH DTVSTVVHGN RTFFSVVDTK TPKGSCGMAI DVSREEALRE ELSRTLKSHA ETLDHLATPV AIFDGERRLQ FYNQAFQQLW DLDLAFLESR PDHAELLDRL RSAGKLPEQL SWKAWKENTL SVYRSIDTQT VLWHLPNGQT LRVIASAHPQ GGATWVFENL TEQVDLETRY NTLVRVQGET IDHLSEGVAV FGPDGRIRLS NPAFRALWGI TETQAAPGTH IRAIEEACAL SYEKPDGWRA FGKMITSFED ERPSSQGTIE LMSGLVLDYA VIPLPNAQTM LTFVNITDSV RAERALLEKN EALRKADELK NDFVQHISYE LRSPLTNIIG FTDLLKSSAI GPLNERQGEY VDHISTSSAV LLTIVNDILD LATVDAGIMR LTYSDIDLTD LLDDVSMQMT DRLQEGGVTL EILAPSHLGD IVADQQRLKQ ILIKIITNAV NFSPEGAKVV LKCWREDADF VFSVSDTGCG IPEDMLPSVF KRFSSNAKGG KRTGAGLGLS IVESFVHLHN GTVSINSVPN QGTTVLCRIP SGVLVHSVAA E
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