Gene Avi_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0049 
SymbolahcY 
ID7389046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp37838 
End bp39367 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content57% 
IMG OID643649790 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_002548014 
Protein GI222147057 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTTCCT CGGCTTTCCC TGATACACGG ATGACACTGG CCTGCCGCAG AATGGCGGGC 
GGCGCATCGG CTTTACCATC TTTTCGGATG GGTGCTGGCC TTGCGTTTCA ACCCGGTCTG
GAGAACGCCA TGAGCACTGT ACAGGATTAC ATCGTCGCCG ATATCGGCCT TGCGGATTAC
GGTCGCAAGG AATTGGATAT TGCCGAAACC GAAATGCCGG GCCTGATGTC CTGCCGCTCG
GAGCTTGGCG AAACCAAGCC GCTAAAGGGC GCCCGCATCA GCGGTTCGCT GCACATGACC
ATTCAGACAG CTGTGCTGAT CGAGACTTTA ACGGCGCTGG GCGCCGAAGT ACGCTGGGCA
TCCTGCAACA TCTTTTCCAC CCAGGACCAT GCCGCCGCCG CAATCGCTGC CTCGGGCGTG
CCGGTCTTTG CCGTCAAGGG TGAAAGCCTG ACGGAATATT GGGATTATAC CGACAGGATC
TTCCAATGGA CCGATGGTGG CCAGTCCAAC ATGATCCTCG ACGATGGCGG CGACGCCACC
ATGTATATCC TGCTTGGTGC GCGCGCCGAA GCCGGTGAAA ACGTGCTGGT CAACCCTTCG
TCCGAAGAAG AAGAAATTCT GTTCGCGCAG ATCAAGAAGC GCATGGCAGC CACACCAGGC
TTTTTCACCA AACAGCGTGA CGCCATCAAG GGTGTCACCG AAGAAACCAC GACAGGCGTC
AACCGCCTCT ACCAGCTCAG CCAGAAGGGC CTGCTGCCTT TCCCGGCGAT CAATGTCAAC
GATTCCGTCA CCAAGTCGAA GTTCGACAAC AAATACGGCT GCAAGGAATC GCTGGTCGAC
GGCATTCGCC GCGCCACCGA CGTGATGATG GCTGGCAAGG TTGCCGTGGT CTGCGGCTAT
GGCGACGTGG GCAAGGGCTG CGCTGCATCG CTGATCGGCG CTGGTGCCCG CGTCAAGGTG
ACGGAAGTCG ACCCGATCTG CGCTTTGCAG GCCGCTATGG ACGGTTTTGA AGTGGTGCGG
CTTGAAGATG TCGTCAAGAC AGCGGATATC TTCATCACCA CGACCGGCAA CAAGGACGTG
ATCCGCATCG AGCATATGCG CGAGATGAAG GACATGGCCA TCGTTGGCAA TATCGGCCAT
TTCGATAATG AAATTCAGGT TGTCGCGCTG AAAAACCTGA AATGGGTTAA CATCAAGCCG
CAGGTCGACA TGATCGAATT CCCGGCGGGC AACCGGATGA TCCTGCTGTC GGAAGGCCGT
TTGCTCAACC TCGGCAATGC CACGGGCCAT CCGTCCTTTG TGATGAGCGC GTCTTTCACC
AACCAGGTTC TGGCCCAGAT CGAGCTTTTC ACCAAGCCCG ACGCCTACAA AAACCAGGTT
TACGTTCTGC CGAAACATCT CGATGAAAAG GTTGCGCGCC TGCATCTGGA AAAGCTCGGC
GTCAGATTGA CTGAACTTTC TGACGAACAG GCCTCCTATA TTGGTGTCAC GCCATCAGGC
CCCTTCAAGG CTGACCACTA CAGATACTAA
 
Protein sequence
MPSSAFPDTR MTLACRRMAG GASALPSFRM GAGLAFQPGL ENAMSTVQDY IVADIGLADY 
GRKELDIAET EMPGLMSCRS ELGETKPLKG ARISGSLHMT IQTAVLIETL TALGAEVRWA
SCNIFSTQDH AAAAIAASGV PVFAVKGESL TEYWDYTDRI FQWTDGGQSN MILDDGGDAT
MYILLGARAE AGENVLVNPS SEEEEILFAQ IKKRMAATPG FFTKQRDAIK GVTEETTTGV
NRLYQLSQKG LLPFPAINVN DSVTKSKFDN KYGCKESLVD GIRRATDVMM AGKVAVVCGY
GDVGKGCAAS LIGAGARVKV TEVDPICALQ AAMDGFEVVR LEDVVKTADI FITTTGNKDV
IRIEHMREMK DMAIVGNIGH FDNEIQVVAL KNLKWVNIKP QVDMIEFPAG NRMILLSEGR
LLNLGNATGH PSFVMSASFT NQVLAQIELF TKPDAYKNQV YVLPKHLDEK VARLHLEKLG
VRLTELSDEQ ASYIGVTPSG PFKADHYRY