| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0048 |
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| Symbol | ptsH |
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| ID | 7389045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 37518 |
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| End bp | 37793 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649789 |
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| Product | phosphocarrier protein HPr |
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| Protein accession | YP_002548013 |
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| Protein GI | 222147056 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCTCCT TCACCAGAGA CCTGCTGATC GTCAACAAGC GCGGCCTTCA TGCCCGGGCG
TCAGCCAAAT TCGTCCAGAC GGTGCAGGGC TTCAATGCCG AAGTCACCGT CAGCAAGGAT
GGAACCACCG TCGGCGGAAC CTCGATCATG GGTCTGATGA TGTTGGCGGC GAGCCCCGGC
TGTACGATTA CCGTTGTTAC CTCAGGCGAG GAGGCCGAAA AAGCAATCGA CACGCTGGAT
GCGCTGGTGC GCGACAAGTT TGGCGAGGAA ATGTAA
|
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| Protein sequence | MTSFTRDLLI VNKRGLHARA SAKFVQTVQG FNAEVTVSKD GTTVGGTSIM GLMMLAASPG
CTITVVTSGE EAEKAIDTLD ALVRDKFGEE M
|
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