Gene Avi_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0047 
Symbol 
ID7389044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp37102 
End bp37503 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content55% 
IMG OID643649788 
ProductPTS system IIA component 
Protein accessionYP_002548012 
Protein GI222147055 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGAC TTGTGCTTGT CACCCATGGC AAGCTGGCTG AAGAATTTCA TTATGCCGTG 
GAACATGTCG TTGGTCCGCA GAAATTCATC GAGACAATCT GTATCGGTCC GGAGGACGAT
ATGGATCAGC GCCGCCAGGA TATTCTGGAT GCTGTGATGC GCGCCGATGA TGGGCATGGG
GTGATCATCC TGACGGATAT GTTCGGGGGA ACGCCTTCGA ATCTGGCAAT TTCGGTGATG
AATACCGGGC GGATCGAAGT GATCGCCGGC GTCAACCTGC CCATGCTGAT CAAGCTGGCG
GGTGTGCGCG GCGAGAACGA TATGGAAAAA GCACTCGTCG ATGCGTCGGA AGCCGGCCGC
AAATACATCA ATGTGGCCAG CCGCGTTCTG AGCGGCAAAT AG
 
Protein sequence
MIGLVLVTHG KLAEEFHYAV EHVVGPQKFI ETICIGPEDD MDQRRQDILD AVMRADDGHG 
VIILTDMFGG TPSNLAISVM NTGRIEVIAG VNLPMLIKLA GVRGENDMEK ALVDASEAGR
KYINVASRVL SGK