Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0047 |
Symbol | |
ID | 7389044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 37102 |
End bp | 37503 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643649788 |
Product | PTS system IIA component |
Protein accession | YP_002548012 |
Protein GI | 222147055 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGAC TTGTGCTTGT CACCCATGGC AAGCTGGCTG AAGAATTTCA TTATGCCGTG GAACATGTCG TTGGTCCGCA GAAATTCATC GAGACAATCT GTATCGGTCC GGAGGACGAT ATGGATCAGC GCCGCCAGGA TATTCTGGAT GCTGTGATGC GCGCCGATGA TGGGCATGGG GTGATCATCC TGACGGATAT GTTCGGGGGA ACGCCTTCGA ATCTGGCAAT TTCGGTGATG AATACCGGGC GGATCGAAGT GATCGCCGGC GTCAACCTGC CCATGCTGAT CAAGCTGGCG GGTGTGCGCG GCGAGAACGA TATGGAAAAA GCACTCGTCG ATGCGTCGGA AGCCGGCCGC AAATACATCA ATGTGGCCAG CCGCGTTCTG AGCGGCAAAT AG
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Protein sequence | MIGLVLVTHG KLAEEFHYAV EHVVGPQKFI ETICIGPEDD MDQRRQDILD AVMRADDGHG VIILTDMFGG TPSNLAISVM NTGRIEVIAG VNLPMLIKLA GVRGENDMEK ALVDASEAGR KYINVASRVL SGK
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