Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0045 |
Symbol | chvG |
ID | 7389042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 34514 |
End bp | 36286 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649786 |
Product | two-component sensor histidine kinase protein |
Protein accession | YP_002548010 |
Protein GI | 222147053 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGATA AGGACGGGGA TCCCGGCGAG AGTCGCAGGC TGCCCTTGCG CCTGTCCTTT TCTCATCCCT TTACCTTGAT CAGACGCATC TTCGGCAATG CCGTTTTCTC CAGTCTGACG CGACGGATCG TCTTCTTTAA TCTTGCGGCG CTGATCGTTC TGGTCGCCGG TATCATGTAT CTCAATCAGT TTCGCGAAGG GCTGATCGAT GCGCGGGTGG AAAGCCTGCT GACCCAGGGG GAAATTATCG CGGGTGCGAT TTCCGCCTCG GCCTCGGTCG ACACCAATTC CATCACCATC GACCCGCAGA AACTGTTGGA ACTGCAGGCG GGGCAAAGCA TTACCCCGGT GCCGAATGAC GAGGACTTGG AATTTCCCAT CAAGCCGGAG CGGGTCGCCC CCGTGCTGCG CCGCCTGATT TCGCCGACCC GCACCAGGGC GCGGCTGTTT GATGCCGACG CCAATCTGCT GCTGGACTCC CGCCATCTTT ATTCCCGCGG TCAGGTGCTG CGCTACGATC TTCCACCCGT CGAGGGGGAT ACCGGCAGCT GGACGGAATG GCTGGCCAAG CAATTCAACC GCATGCTGCA ACCAAGCAAT GTACCGCTCT ACAAGGAAGC GCCGGGCGGG GATGGATCGA TCTATCCTGA AGTGATGAAT GCGCTAACCG GGGTGCGCGG TGCCGTGGTG CGCGTGACCG AACAGGGCGA GTTGATTGTT TCCGTGGCGG TGCCGGTCCA GCGGTTCCGC GCCGTGCTCG GCGTGCTTTT GCTATCCACC CAGGCTGGCG ATATCGACAA GATCGTCCAT GCGGAACGCC TAGCGATCCT GCGGGTGTTC GGTGTGGCCA CGCTGGTCAA TATCGTGCTT TCTCTGCTGC TGTCCTCGAC CATTGCCAAT CCGCTGCGGC GCCTGTCGGC AGCGGCCATT CGCGTCCGGC GCGGCGCCAA GGAGCGGGAG GAAATCCCGG ATTTCTCTGC GCGCCAGGAT GAAATCGGCA ATCTGTCCGT GGCCCTGCGG GAAATGACCA CGGCACTTTA CGACCGGATC GACGCCATCG AGAGCTTTGC CGCCGATGTC AGTCACGAGT TGAAAAATCC GCTGACGTCG CTGCGCAGCG CCGTCGAAAC CCTGCCGCTT GCCAAGACCG ATGTCTCGAA GCAGCGGCTT CTGGATGTGA TCCAGCATGA CGTCCGCCGG CTTGACCGGT TGATCAGCGA TATCTCCGAT GCCTCGCGGC TGGATGCAGA ACTGGCGCGC ACGGATGCGG CACCGGTCGA TATGGAAGTC GTGCTTGGCA ATCTGGTGGA GATTTCCAGG CAGATCCGCA GCAGCAAGAA GCCGGTCGAT ATCGAATATG TCGTGGAGCA CAAGCAGGGC CAGAAGGTCC GCTATATCAT CAACGGTCAT GACCTGCGTA TTGGCCAGAT CGTCACCAAC CTGATTGAAA ATGCCCGTTC CTTCGTGCCG GAAAAGGAAG GCCGTATCGT GGTGCGCCTA TCGCGGACCC GCAGCCGTTG CGTCGTGCAG GTGGAAGACA ACGGTCCCGG CATCCTGGTC GAGAATATCG ACCGGATCTT TGAGCGCTTT TATACCGACC GTCCCGACGG CGAAAGCTTC GGCCAGAATT CAGGGCTTGG CCTCTCCATC AGCCGGCAGA TCGCCGAGGC GCATGGCGGA TCGTTGCGGG CTGAAAACAT CCTGGAACCG GAAACTGCAC GGATCCTCGG GGCCCGCTTC ATCCTGACCC TGCCGGCAGA GCCATCTCCA TGA
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Protein sequence | MDDKDGDPGE SRRLPLRLSF SHPFTLIRRI FGNAVFSSLT RRIVFFNLAA LIVLVAGIMY LNQFREGLID ARVESLLTQG EIIAGAISAS ASVDTNSITI DPQKLLELQA GQSITPVPND EDLEFPIKPE RVAPVLRRLI SPTRTRARLF DADANLLLDS RHLYSRGQVL RYDLPPVEGD TGSWTEWLAK QFNRMLQPSN VPLYKEAPGG DGSIYPEVMN ALTGVRGAVV RVTEQGELIV SVAVPVQRFR AVLGVLLLST QAGDIDKIVH AERLAILRVF GVATLVNIVL SLLLSSTIAN PLRRLSAAAI RVRRGAKERE EIPDFSARQD EIGNLSVALR EMTTALYDRI DAIESFAADV SHELKNPLTS LRSAVETLPL AKTDVSKQRL LDVIQHDVRR LDRLISDISD ASRLDAELAR TDAAPVDMEV VLGNLVEISR QIRSSKKPVD IEYVVEHKQG QKVRYIINGH DLRIGQIVTN LIENARSFVP EKEGRIVVRL SRTRSRCVVQ VEDNGPGILV ENIDRIFERF YTDRPDGESF GQNSGLGLSI SRQIAEAHGG SLRAENILEP ETARILGARF ILTLPAEPSP
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