| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0044 |
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| Symbol | chvI |
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| ID | 7389041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 33554 |
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| End bp | 34276 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643649785 |
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| Product | two component response regulator |
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| Protein accession | YP_002548009 |
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| Protein GI | 222147052 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGACAA TTGCGCTTGT TGACGACGAC CGGAATATCC TGACGTCGGT TTCGATCGCT
CTCGAAGCCG AGGGCTACAA GGTTGAAACC TATACGGATG GAGCTTCGGC GCTGGACGGG
CTTCTGGCGC GGCCGCCACA GCTGGCGATC TTCGATATCA AGATGCCACG CATGGACGGG
ATGGAGCTTT TGCGCCGCCT GCGTCAGAAG TCCGATATCC CGGTGATTTT CCTCACCTCC
AAGGATGAGG AAATCGATGA ATTGTTCGGC TTGAAAATGG GTGCCGACGA CTTCATCACC
AAGCCGTTTT CTCAGCGCCT GCTGGTGGAG CGGGTCAAGG CCATTCTACG TCGCGCGGCC
AATCGCGAGA CTGGAAACGC ACCCGGCAAT GTCAAGACTG CTGCCGAGCA GCAGGCCCGC
AACCTGGAGC GCGGCCAACT GGTCATGGAC CAGGAGCGCC ATACCTGCAC CTGGAAAGGC
GACCCGGTCA CGCTGACAGT CACCGAATTT CTGATCCTGC ATTCGCTGGC CCAGCGGCCC
GGCGTGGTGA AAAGCCGCGA CGCGCTGATG GATGCCGCCT ATGACGAACA GGTCTATGTC
GATGACCGCA CCATTGACAG CCATATCAAG CGCCTGCGAA AGAAGTTCAA AATGGTGGAC
AATGATTTCG ACATGATCGA AACGCTGTAC GGCGTTGGAT ACCGCTTCCG CGAAACGGCC
TGA
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| Protein sequence | MQTIALVDDD RNILTSVSIA LEAEGYKVET YTDGASALDG LLARPPQLAI FDIKMPRMDG
MELLRRLRQK SDIPVIFLTS KDEEIDELFG LKMGADDFIT KPFSQRLLVE RVKAILRRAA
NRETGNAPGN VKTAAEQQAR NLERGQLVMD QERHTCTWKG DPVTLTVTEF LILHSLAQRP
GVVKSRDALM DAAYDEQVYV DDRTIDSHIK RLRKKFKMVD NDFDMIETLY GVGYRFRETA
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