Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0042 |
Symbol | pckA |
ID | 7389040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 31588 |
End bp | 33198 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643649784 |
Product | phosphoenolpyruvate carboxykinase |
Protein accession | YP_002548008 |
Protein GI | 222147051 |
COG category | [C] Energy production and conversion |
COG ID | [COG1866] Phosphoenolpyruvate carboxykinase (ATP) |
TIGRFAM ID | [TIGR00224] phosphoenolpyruvate carboxykinase (ATP) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGAGC TTGGAGTGAA CAATAGCCGT CTTGGGATCG AGACCATTGG CTTGGGCAAG GCCGCCAATG TCCATTATAA TCTGCTGCCC GCCGCCCTTT ATGAGCATGC GATCCGCAAC GGTGAAGCCG TGCTGACTGC GGACGGCGCG CTTTTGGCCG AGACCGGACA GCATACGGGC CGCTCGCCCA AGGACAAGTT CATCCTGCGT GATGCCAATA CCGATAGCCA GATCTGGTGG GACAATAACA AGCCAATGTC GAAAGAGCAT TTCGACATCC TGCATCAGGA CATGCTGGCG CATGTGGCTG GCAAGACCCT GTTCGTACAG GATCTGATTG GTGGCGCCGA TGCCGCCAAC GCTTTGCCAA CCCGCGTGGT AACGGAACTT GCATGGCATT CGCTGTTTAT CCGTAACCTG CTGATTCGTC CGGAACGCGC CGCGCTTGCC GATTTCGAAG CGAAATTCAC CATTATCGAC CTGCCCAGCT TCAAGGCTGA TCCGGCCCGT CATGGCTGCC GGACCGAAAC GGTCATCGCC TGCGACTTCA CCAACAATAT CGTGCTGATC GCCGGTACCT ACTATGCCGG TGAAATGAAG AAGTCGGTGT TCACGGCGCT GAACTACATG CTGCCCGCCA AACAGGTCAT GCCGATGCAT TGCTCGGCCA ATGTTGGCCC GGCTGGTGAT TCGGCTGTGT TCTTCGGTCT GTCCGGCACC GGCAAAACCA CGCTGTCTGC CGACCCTGCC CGCACACTGA TCGGCGATGA CGAGCATGGT TGGGGCGAAG ACGGCATCTT CAACTTCGAA GGTGGCTGCT ACGCCAAGAC CATTCGTCTG TCGGCGGAAG CTGAGCCGGA AATCTACGCC ACCACCAAGC GGTTCGGCAC GGTGCTGGAA AATGTCGTTC TGGATGAAAA CCGGGTTCCG GATTTCAACG ATGGCTCGAA GACCGAAAAT ACCCGTTGCG CCTATCCGCT GAACTTCATA CCCAATGCCT CGCCCACCGG CCGCGCCGGA CATCCGAAGA CCATCATCAT GCTTACCGCA GATGCCTTCG GCGTCATGCC GCCGATCGCC AAGCTGACAC CAGAACAGGC GATGTACCAC TTCCTTTCCG GCTACACCGC GAAAGTGGCT GGCACGGAGC GCGGCGTAAC CGAGCCGGAA GCCACCTTCT CGACCTGCTT CGGCGCACCG TTCATGCCTC GCCATCCGGC AGAATATGGC AATCTGCTCA AGGAGTTGAT TGCCCGCCAC GAAGTGGATT GCTGGCTGGT CAACACTGGC TGGACCGGCG GTGCCTACGG CGTTGGTAAC CGTATGCCGA TCAAGGCAAC TCGGGCGCTG CTGACGGCGG CTCTCTCCGG AGAGTTGAAG AAGGTCGAGT TCCGCACCGA TGCCAATTTC GGCTTCGCGG TACCAGTTTC TGTCGAAGGC GTCGATACCA GCATTCTCGA CCCCCGCTCG ACCTGGGCAA ATGGGACTGA CTATGACGCG CAGGCCAAGA AACTGGTCGG CATGTTCATC GCCAATTTCG AGAAATTCGA AGCCCATGTG GACAGCAATG TCCTTGATGC GGCTCCGGTT CTGGCTGTTG CTGCGCAGTA A
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Protein sequence | MEELGVNNSR LGIETIGLGK AANVHYNLLP AALYEHAIRN GEAVLTADGA LLAETGQHTG RSPKDKFILR DANTDSQIWW DNNKPMSKEH FDILHQDMLA HVAGKTLFVQ DLIGGADAAN ALPTRVVTEL AWHSLFIRNL LIRPERAALA DFEAKFTIID LPSFKADPAR HGCRTETVIA CDFTNNIVLI AGTYYAGEMK KSVFTALNYM LPAKQVMPMH CSANVGPAGD SAVFFGLSGT GKTTLSADPA RTLIGDDEHG WGEDGIFNFE GGCYAKTIRL SAEAEPEIYA TTKRFGTVLE NVVLDENRVP DFNDGSKTEN TRCAYPLNFI PNASPTGRAG HPKTIIMLTA DAFGVMPPIA KLTPEQAMYH FLSGYTAKVA GTERGVTEPE ATFSTCFGAP FMPRHPAEYG NLLKELIARH EVDCWLVNTG WTGGAYGVGN RMPIKATRAL LTAALSGELK KVEFRTDANF GFAVPVSVEG VDTSILDPRS TWANGTDYDA QAKKLVGMFI ANFEKFEAHV DSNVLDAAPV LAVAAQ
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