Gene Avi_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0040 
Symbol 
ID7389038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp30362 
End bp30940 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content57% 
IMG OID643649782 
Producthypothetical protein 
Protein accessionYP_002548006 
Protein GI222147049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTCA TTGATCCCAA CAAAGCCGCG CCGGTTTCCG GCAGGCGTGT GTTTCTTGGT 
GCGGCAGCGA CAGCGATAGC CGCGACCGCC GCAGGGCAGA GCGGACAGGC AGCGGATACA
AAAACCGGCG GCGGTCCGCT ATCAGACATT CCCATCGCTT TGCCCCGGAC AGAATTCGTC
TATGAGGCGA TTTTTACCCT TCAGGATACG ATTGAGATGG GTGCGTCCCC GCAGGGCGAC
AGGCGTATCA TCAATATCAC CGGCGGTGAA TTTGCCGGAC CTCGGATTAA GGGCAAGGTG
ATGCCTGGCG GTGCGGACCG GCAAGTGCTG CGTAAGGACG GTGTGCGGCT TCTCAATGCG
CTCTATGAAT TGCAGGCGGA TGACGGTGCC GTCATTACCG TCAACAACAG GGTCTTGATC
GACCGTCAAC CGGACGGCAC GCAATATGCT TTTTCGCATA TCGATATTAC TGCACCGGTC
GGACCACATG ACTGGCTGAA CCGTCGTGTC TTTGTCGGTA CCCTGAACAG CCTGCGGCCC
AAACCAATGG TGCTGATTCG GGTCTTCAGT CTGGTTTAA
 
Protein sequence
MTFIDPNKAA PVSGRRVFLG AAATAIAATA AGQSGQAADT KTGGGPLSDI PIALPRTEFV 
YEAIFTLQDT IEMGASPQGD RRIINITGGE FAGPRIKGKV MPGGADRQVL RKDGVRLLNA
LYELQADDGA VITVNNRVLI DRQPDGTQYA FSHIDITAPV GPHDWLNRRV FVGTLNSLRP
KPMVLIRVFS LV