Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0040 |
Symbol | |
ID | 7389038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 30362 |
End bp | 30940 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649782 |
Product | hypothetical protein |
Protein accession | YP_002548006 |
Protein GI | 222147049 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATTCA TTGATCCCAA CAAAGCCGCG CCGGTTTCCG GCAGGCGTGT GTTTCTTGGT GCGGCAGCGA CAGCGATAGC CGCGACCGCC GCAGGGCAGA GCGGACAGGC AGCGGATACA AAAACCGGCG GCGGTCCGCT ATCAGACATT CCCATCGCTT TGCCCCGGAC AGAATTCGTC TATGAGGCGA TTTTTACCCT TCAGGATACG ATTGAGATGG GTGCGTCCCC GCAGGGCGAC AGGCGTATCA TCAATATCAC CGGCGGTGAA TTTGCCGGAC CTCGGATTAA GGGCAAGGTG ATGCCTGGCG GTGCGGACCG GCAAGTGCTG CGTAAGGACG GTGTGCGGCT TCTCAATGCG CTCTATGAAT TGCAGGCGGA TGACGGTGCC GTCATTACCG TCAACAACAG GGTCTTGATC GACCGTCAAC CGGACGGCAC GCAATATGCT TTTTCGCATA TCGATATTAC TGCACCGGTC GGACCACATG ACTGGCTGAA CCGTCGTGTC TTTGTCGGTA CCCTGAACAG CCTGCGGCCC AAACCAATGG TGCTGATTCG GGTCTTCAGT CTGGTTTAA
|
Protein sequence | MTFIDPNKAA PVSGRRVFLG AAATAIAATA AGQSGQAADT KTGGGPLSDI PIALPRTEFV YEAIFTLQDT IEMGASPQGD RRIINITGGE FAGPRIKGKV MPGGADRQVL RKDGVRLLNA LYELQADDGA VITVNNRVLI DRQPDGTQYA FSHIDITAPV GPHDWLNRRV FVGTLNSLRP KPMVLIRVFS LV
|
| |