Gene Avi_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0037 
SymbolhisF 
ID7389035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp28176 
End bp28970 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content58% 
IMG OID643649779 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_002548003 
Protein GI222147046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.981941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCA AGGCCCGCAT TATTCCTTGT CTCGACGTGA AGGATGGCCG CGTCGTCAAG 
GGCGTGAACT TTGTCGATCT CATTGATGCC GGTGATCCGG TCGAAGCGGC CAAGGCCTAT
GACGCTGCCG GTGCCGATGA GCTGTGTTTT CTGGACATTA CCGCCTCATC CGATAATCGC
GAGACGATTT TTGATGTCGT CGCCCGCACC GCAGATCATT GCTTCATGCC GGTCACGGTG
GGGGGCGGTG TGCGGGCGGT CGGCGATATT CGCAAGCTGC TGCTGGCCGG TGCCGATAAG
GTTTCAATCA ACTCGGCAGC CGTGAGTAAT CCCGATTTTG TCGCCGAAGC CGCCGATAAA
TTCGGCAATC AATGTATTGT GGTTTCGATT GATGCAAAAC GTCGCCGAAG CCAGGCCAGC
GGTGGCGATA ATCTCAGCGC CTGGGAGATT TATACCCATG GAGGGCGCAA CGCGACCGGC
ATTGACGCTG TCGAATTTGC GGTCAAAATG GTCGAGCGCG GCGCAGGCGA ATTGCTGGTC
ACGTCAATGG ATCGTGACGG CACCAAAAGC GGTTATGATT TGGAACTGAC CCGTGCCATC
GCAGACGCGG TTCGGGTGCC GGTGATTGCC TCTGGCGGTG TCGGCACACT GGACGATCTG
GTGGCGGGCG TCAGGCAAGG CCATGCCACT GCCGTTCTGG CGGCCTCGAT TTTCCATTTC
GGCACGTATT CGATTGCGGA AGCCAAGGCC CATATGGCCA ATGCCGGTAT CCCCATGCGT
CTCGACAAGG CCTGA
 
Protein sequence
MTLKARIIPC LDVKDGRVVK GVNFVDLIDA GDPVEAAKAY DAAGADELCF LDITASSDNR 
ETIFDVVART ADHCFMPVTV GGGVRAVGDI RKLLLAGADK VSINSAAVSN PDFVAEAADK
FGNQCIVVSI DAKRRRSQAS GGDNLSAWEI YTHGGRNATG IDAVEFAVKM VERGAGELLV
TSMDRDGTKS GYDLELTRAI ADAVRVPVIA SGGVGTLDDL VAGVRQGHAT AVLAASIFHF
GTYSIAEAKA HMANAGIPMR LDKA