Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0035 |
Symbol | hisH |
ID | 7389033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 26753 |
End bp | 27403 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643649777 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_002548001 |
Protein GI | 222147044 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTTG TGATTATTGA CTACGGATCG GGCAATCTGC GCTCCGCCAC CAAGGCGTTC GAGCGGGCCT CCCGGGAATC CGGCCTTGAT GCCGAAATCG AACTGACCGA CAAGGCAGAC CGGGTGGCAA CCGCCGACCG GATCGTGCTG CCCGGCGTCG GTGCCTATGC CGATTGCAAG CGGGGCCTCG ATGCCGTGCC AGGCATGCAT GAAGCGCTGG TCGAAGCGGT CGAGGTCAAG GCCCGCCCCT TCCTCGGCAT CTGCGTCGGC ATGCAGTTGA TGTCGTCGCG CGGATTGGAA AAGACCGTGA CTGAAGGCCT CGACTGGATC AAGGGCGATG TGGTGGAAAT GACCCCTTCC GATCCGGGCC TGAAGATCCC GCAGATCGGC TGGAACACGC TGACGCTTGC CCGTCCGCAT CCGCTATTTG ACGGGATTGC CACCGGCAAT GACGGGTTGC ATGCCTATTT CGTCCATTCC TACCATCTGG CGGCCAGCAA TGCCGATGAG GTCATTGCCA CGACCGACTA TGGCGGCCCG ATGACCGCTT TTGTGGGACG TGACAATATG GCCGGCGCGC AATTCCATCC GGAAAAGAGC CAGTCTCTAG GCCTCCAGCT GATTTCTAAT TTTCTCAATT GGGCGCCGTG A
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Protein sequence | MRVVIIDYGS GNLRSATKAF ERASRESGLD AEIELTDKAD RVATADRIVL PGVGAYADCK RGLDAVPGMH EALVEAVEVK ARPFLGICVG MQLMSSRGLE KTVTEGLDWI KGDVVEMTPS DPGLKIPQIG WNTLTLARPH PLFDGIATGN DGLHAYFVHS YHLAASNADE VIATTDYGGP MTAFVGRDNM AGAQFHPEKS QSLGLQLISN FLNWAP
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