Gene Avi_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0035 
SymbolhisH 
ID7389033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp26753 
End bp27403 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content61% 
IMG OID643649777 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionYP_002548001 
Protein GI222147044 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTG TGATTATTGA CTACGGATCG GGCAATCTGC GCTCCGCCAC CAAGGCGTTC 
GAGCGGGCCT CCCGGGAATC CGGCCTTGAT GCCGAAATCG AACTGACCGA CAAGGCAGAC
CGGGTGGCAA CCGCCGACCG GATCGTGCTG CCCGGCGTCG GTGCCTATGC CGATTGCAAG
CGGGGCCTCG ATGCCGTGCC AGGCATGCAT GAAGCGCTGG TCGAAGCGGT CGAGGTCAAG
GCCCGCCCCT TCCTCGGCAT CTGCGTCGGC ATGCAGTTGA TGTCGTCGCG CGGATTGGAA
AAGACCGTGA CTGAAGGCCT CGACTGGATC AAGGGCGATG TGGTGGAAAT GACCCCTTCC
GATCCGGGCC TGAAGATCCC GCAGATCGGC TGGAACACGC TGACGCTTGC CCGTCCGCAT
CCGCTATTTG ACGGGATTGC CACCGGCAAT GACGGGTTGC ATGCCTATTT CGTCCATTCC
TACCATCTGG CGGCCAGCAA TGCCGATGAG GTCATTGCCA CGACCGACTA TGGCGGCCCG
ATGACCGCTT TTGTGGGACG TGACAATATG GCCGGCGCGC AATTCCATCC GGAAAAGAGC
CAGTCTCTAG GCCTCCAGCT GATTTCTAAT TTTCTCAATT GGGCGCCGTG A
 
Protein sequence
MRVVIIDYGS GNLRSATKAF ERASRESGLD AEIELTDKAD RVATADRIVL PGVGAYADCK 
RGLDAVPGMH EALVEAVEVK ARPFLGICVG MQLMSSRGLE KTVTEGLDWI KGDVVEMTPS
DPGLKIPQIG WNTLTLARPH PLFDGIATGN DGLHAYFVHS YHLAASNADE VIATTDYGGP
MTAFVGRDNM AGAQFHPEKS QSLGLQLISN FLNWAP