Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0032 |
Symbol | hslV |
ID | 7389031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 25374 |
End bp | 25934 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649775 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_002547999 |
Protein GI | 222147042 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC ATAATCCCTA TGGAACCATG CATGGCACCA CGATCATCAC GGTGCGCAAG GGCGGCATGG TGGTGATGGC CGGTGACGGA CAGGTCAGCC TTGGCCAGAC CGTGATGAAG GGCAATGCCC GCAAGGTGCG CCGCATTGGC AAGGGCGAGG TGATCGCCGG TTTTGCCGGA GCGACGGCGG ATGCCTTCAC CCTGCTGGAG CGGCTGGAAA AGAAGCTGGA GCAATATCCC GGCCAGTTGA TGCGCGCCGC CGTCGAGCTT GCCAAGGACT GGCGCACCGA CAAATATCTG CGCAATCTGG AAGCGATGAT GCTGGTGGCC GATAAGACGG TGACACTGGC GATTACCGGC AATGGCGATG TGCTGGAACC CGAACACGGC ACGATTGCCA TCGGTTCGGG CGGCAATTAC GCGCTGGCTG CGGCTCTGGC CTTGATGGAT ACCGAAAAGT CGGCGGAAGA AGTGGCCCGC AAGGCCATGA AGATCGCCGC CGATATCTGC GTCTATACCA ATGAAAACGT GCTGGTCGAA ACGCTGGAAA GCGCCAACTG A
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Protein sequence | MSEHNPYGTM HGTTIITVRK GGMVVMAGDG QVSLGQTVMK GNARKVRRIG KGEVIAGFAG ATADAFTLLE RLEKKLEQYP GQLMRAAVEL AKDWRTDKYL RNLEAMMLVA DKTVTLAITG NGDVLEPEHG TIAIGSGGNY ALAAALALMD TEKSAEEVAR KAMKIAADIC VYTNENVLVE TLESAN
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