Gene Avi_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0030 
Symbol 
ID7389029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp22899 
End bp23855 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID643649773 
Producthypothetical protein 
Protein accessionYP_002547997 
Protein GI222147040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGG TGCGTCGCTT AGCTCTGGTC TTTATTCTTT CGGTTTCATG TGCTTTTTCC 
GCTGCCTTCG TGCCGGAAAT CCAGGCTGCC GAGGTGCGGA TGGTGCCTGC GGGCAATCGC
AATGCCGAAC AGCCCCCCAT TCCCGGTGCA TCGAAGCAGC GCACCAAGGA AACCAAGACC
ACCTTCGATC TGAAATACGA GAAGATTCGC GATCTGCTGA TCAAGGATCG TCAGTTGATC
GGCAAGATCA AGAAAACCGC GGCGGCCTAT AATATCGACC CGATCCACAT CGTTGGCGCG
CTGGTCGGTG AGCATACCTA TAATGTCGAT GCCTACGACA CATTGCAAAG CTACTATGTA
AAGGCGGCCT CCTATGCCGG TCACACGTTC CGCTTTGCCT ATGATGGCGA GGATGTCGAT
GATTTCGTCG CCCGCCCGGA ATTTGCCGCC TGCGCCGAGT TGAAGGATTC TGCCAAGCTG
TGGACCTGCC GGGAAAATGT CTGGGAAGAC AAGTTCCAGG GCAAGCGGGT CGGCAACAAG
AGCTTTCCCA ACAACCGCTT CAGCGCGGTG TTTTTCCAGC CTTTCTATGC CGGGCAAACC
TTTGGCCTTG GCCAGATCAA CCCGCTGACG GCATTGATGC TGACCGACAT GGTCCACCAG
ACATCCGGCT ATCCCAAGCT GGACGAGAAA GATGCGGCAG GGCTCTATAA GGCCATCATG
GACCCGGATA CCTCGCTTGC CTATATCGCG GCGATCATCC GCAAATCCAT CGATGACTAT
AAAACCTATG CCAATGTGGA TATTTCCAAC AATCCGGGCC TGACGGCGAC GCTTTACAAT
GTCGGGAACT CCGAAGCGCG AGCCCGGGCA CTGGGACGGC GTGGCGGCCT GCCGGAAGAG
AATTACTATG GCTGGCTGGT CAATGACCGG CTGAAAGAAC TTGAAGGCCT GCTTTAG
 
Protein sequence
MEMVRRLALV FILSVSCAFS AAFVPEIQAA EVRMVPAGNR NAEQPPIPGA SKQRTKETKT 
TFDLKYEKIR DLLIKDRQLI GKIKKTAAAY NIDPIHIVGA LVGEHTYNVD AYDTLQSYYV
KAASYAGHTF RFAYDGEDVD DFVARPEFAA CAELKDSAKL WTCRENVWED KFQGKRVGNK
SFPNNRFSAV FFQPFYAGQT FGLGQINPLT ALMLTDMVHQ TSGYPKLDEK DAAGLYKAIM
DPDTSLAYIA AIIRKSIDDY KTYANVDISN NPGLTATLYN VGNSEARARA LGRRGGLPEE
NYYGWLVNDR LKELEGLL