Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0030 |
Symbol | |
ID | 7389029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 22899 |
End bp | 23855 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643649773 |
Product | hypothetical protein |
Protein accession | YP_002547997 |
Protein GI | 222147040 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATGG TGCGTCGCTT AGCTCTGGTC TTTATTCTTT CGGTTTCATG TGCTTTTTCC GCTGCCTTCG TGCCGGAAAT CCAGGCTGCC GAGGTGCGGA TGGTGCCTGC GGGCAATCGC AATGCCGAAC AGCCCCCCAT TCCCGGTGCA TCGAAGCAGC GCACCAAGGA AACCAAGACC ACCTTCGATC TGAAATACGA GAAGATTCGC GATCTGCTGA TCAAGGATCG TCAGTTGATC GGCAAGATCA AGAAAACCGC GGCGGCCTAT AATATCGACC CGATCCACAT CGTTGGCGCG CTGGTCGGTG AGCATACCTA TAATGTCGAT GCCTACGACA CATTGCAAAG CTACTATGTA AAGGCGGCCT CCTATGCCGG TCACACGTTC CGCTTTGCCT ATGATGGCGA GGATGTCGAT GATTTCGTCG CCCGCCCGGA ATTTGCCGCC TGCGCCGAGT TGAAGGATTC TGCCAAGCTG TGGACCTGCC GGGAAAATGT CTGGGAAGAC AAGTTCCAGG GCAAGCGGGT CGGCAACAAG AGCTTTCCCA ACAACCGCTT CAGCGCGGTG TTTTTCCAGC CTTTCTATGC CGGGCAAACC TTTGGCCTTG GCCAGATCAA CCCGCTGACG GCATTGATGC TGACCGACAT GGTCCACCAG ACATCCGGCT ATCCCAAGCT GGACGAGAAA GATGCGGCAG GGCTCTATAA GGCCATCATG GACCCGGATA CCTCGCTTGC CTATATCGCG GCGATCATCC GCAAATCCAT CGATGACTAT AAAACCTATG CCAATGTGGA TATTTCCAAC AATCCGGGCC TGACGGCGAC GCTTTACAAT GTCGGGAACT CCGAAGCGCG AGCCCGGGCA CTGGGACGGC GTGGCGGCCT GCCGGAAGAG AATTACTATG GCTGGCTGGT CAATGACCGG CTGAAAGAAC TTGAAGGCCT GCTTTAG
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Protein sequence | MEMVRRLALV FILSVSCAFS AAFVPEIQAA EVRMVPAGNR NAEQPPIPGA SKQRTKETKT TFDLKYEKIR DLLIKDRQLI GKIKKTAAAY NIDPIHIVGA LVGEHTYNVD AYDTLQSYYV KAASYAGHTF RFAYDGEDVD DFVARPEFAA CAELKDSAKL WTCRENVWED KFQGKRVGNK SFPNNRFSAV FFQPFYAGQT FGLGQINPLT ALMLTDMVHQ TSGYPKLDEK DAAGLYKAIM DPDTSLAYIA AIIRKSIDDY KTYANVDISN NPGLTATLYN VGNSEARARA LGRRGGLPEE NYYGWLVNDR LKELEGLL
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