Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0027 |
Symbol | |
ID | 7389027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 21148 |
End bp | 22152 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643649771 |
Product | hypothetical protein |
Protein accession | YP_002547995 |
Protein GI | 222147038 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.715875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGAAGCGTT ATACTGGTTC GGTCGATAAC ATATCTGACG GTCGAGGGGG GATTTTGGGC AAACAGGCAG ACGACTTACT GCTTCAGCGC ATCGCAAACT GGAAGACTGC TTACACCGAT GGCGCCACGG GTGTCTTGGC GGCCATTGAA GCTATGCTGT GGGATCATGC CGCGTTCCGA ACGGCAATTA GGATTGTCAA TCTCGCCAGT CAACGACAGC AGGCAGAGGT TCCGGAAGGT GACGGTCCAT TGCTAAATCA GATGCTTTTC GATCTATTGG CAAAGGGTTA CTGGTCCAGT CTACTTCTCG GGGTCAGGAA GCTGCTCGAT CCGCACCCAC TTGTTGGACC TCGCGGGGTT TATTCACTTC GGGCAATCCT CAATGACGTG AAAGCTTGCC GACCTAAACT CACTCGACGA GTATACGTCG AGCATCTTCG GATGTGCCGC TACGATCTCA ACCTACTTCG ACAGGAAAAC TGGGAGGCCA TAAGAGCTGC AACGGGAAAC GCAATATGGG AGGGCGACAC GGCCCTACAC CTCAGCGAAT CTAGTCATCG AGATTTCGAT TATCTCAGCG GGGTCAAGGA AGCTGATCGG AGTGAGATCG ACCTAATAGA TCCCGCCGTT CTGGAATTAA TCGAAACACG TCTCGCGGAA CTTGATCGCA TCAGCGAGCA TGCCTCCAGC CACATCGCTC ATGCAGGCAA CGCTGAAAGT CGTCTGGGGA AGAATCTCGA GGAATTTAAC ATACGCGACG CAAGGAAGGT GCTCAAAGCT CTGAAGGAGA TTGGTGACCT GATCGGGCTC TGGTTTACCA ACGGTGAGAT TTCTAACCTA GCCGTCTATC AGGGTAACCA ATTCGAAGGG CTAGACATGG TTTTGGTACC CTCAGCCGAC ATGCCGGTGC TAGATGCGAA CTGGGATTTA ATTGATCAGG ATATCGAGTC ATGGCGCCTA GAGCCCGACG ATCTTCTTTC GGGAAATGGT TCAGTTAGCG GTTAA
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Protein sequence | MKRYTGSVDN ISDGRGGILG KQADDLLLQR IANWKTAYTD GATGVLAAIE AMLWDHAAFR TAIRIVNLAS QRQQAEVPEG DGPLLNQMLF DLLAKGYWSS LLLGVRKLLD PHPLVGPRGV YSLRAILNDV KACRPKLTRR VYVEHLRMCR YDLNLLRQEN WEAIRAATGN AIWEGDTALH LSESSHRDFD YLSGVKEADR SEIDLIDPAV LELIETRLAE LDRISEHASS HIAHAGNAES RLGKNLEEFN IRDARKVLKA LKEIGDLIGL WFTNGEISNL AVYQGNQFEG LDMVLVPSAD MPVLDANWDL IDQDIESWRL EPDDLLSGNG SVSG
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