Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0019 |
Symbol | trpF |
ID | 7389021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 14528 |
End bp | 15202 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649765 |
Product | N-(5'-phosphoribosyl)anthranilate isomerase |
Protein accession | YP_002547989 |
Protein GI | 222147032 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTG ATGTCAAAAT TTGCGGATTG AAGACCGAGG AAGCCGTCGA AAAGGCTGTC AGCCTGGGGG CCACCCATGT CGGCTTCATC TTCTTTGAGA AAAGCCCAAG ACATATCGAA CCCGATATCG CCGGACGCAT TGCCGAAAAG GCGCGGGGCA GGGCGAAGAT CGTTGCGGTC ACCGTGGACG CGGACACCGA TGACCTTGAT GATATTGTGT ATCTGCTAAA GCCGGATATC CTGCAATTGC ATGGCCATGA AAGCCCGCAA CAGGTGCTGA CCATCAAGGC GCTCTACGGT CTTCCTGTCA TGAAGGTGTT TTCCATCCGC GAACCCGCTG ATCTTTTGCA GATCGATGCC TATATAGGGA TAGCAGATCG TTTTCTGCTG GATGCCAAGG CGCCTGAAGG CTCCGATCTG CCGGGCGGCA ATGGTGTCAC CTTCGATTGG CGTCTGCTGC GCGATCTTGA CGCAGAGGTC GATTACATGC TTTCGGGTGG GCTCAACAAG GACAATGTCG GGCAAGCCCT TGCCGAGACG GCAGCGCGAG GCCTGGATGT GTCTTCCGGC GTCGAAAGCG CGCCGGGCGT CAAGGATCTC GAACGGATGG ATCAGTTCTT CGCCGCCGTC AGGCTGGCAA CGGCCACAGC GCCGGTTTCA GGGAGTGTAC AGTGA
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Protein sequence | MKPDVKICGL KTEEAVEKAV SLGATHVGFI FFEKSPRHIE PDIAGRIAEK ARGRAKIVAV TVDADTDDLD DIVYLLKPDI LQLHGHESPQ QVLTIKALYG LPVMKVFSIR EPADLLQIDA YIGIADRFLL DAKAPEGSDL PGGNGVTFDW RLLRDLDAEV DYMLSGGLNK DNVGQALAET AARGLDVSSG VESAPGVKDL ERMDQFFAAV RLATATAPVS GSVQ
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