Gene Avi_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0019 
SymboltrpF 
ID7389021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp14528 
End bp15202 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID643649765 
ProductN-(5'-phosphoribosyl)anthranilate isomerase 
Protein accessionYP_002547989 
Protein GI222147032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTG ATGTCAAAAT TTGCGGATTG AAGACCGAGG AAGCCGTCGA AAAGGCTGTC 
AGCCTGGGGG CCACCCATGT CGGCTTCATC TTCTTTGAGA AAAGCCCAAG ACATATCGAA
CCCGATATCG CCGGACGCAT TGCCGAAAAG GCGCGGGGCA GGGCGAAGAT CGTTGCGGTC
ACCGTGGACG CGGACACCGA TGACCTTGAT GATATTGTGT ATCTGCTAAA GCCGGATATC
CTGCAATTGC ATGGCCATGA AAGCCCGCAA CAGGTGCTGA CCATCAAGGC GCTCTACGGT
CTTCCTGTCA TGAAGGTGTT TTCCATCCGC GAACCCGCTG ATCTTTTGCA GATCGATGCC
TATATAGGGA TAGCAGATCG TTTTCTGCTG GATGCCAAGG CGCCTGAAGG CTCCGATCTG
CCGGGCGGCA ATGGTGTCAC CTTCGATTGG CGTCTGCTGC GCGATCTTGA CGCAGAGGTC
GATTACATGC TTTCGGGTGG GCTCAACAAG GACAATGTCG GGCAAGCCCT TGCCGAGACG
GCAGCGCGAG GCCTGGATGT GTCTTCCGGC GTCGAAAGCG CGCCGGGCGT CAAGGATCTC
GAACGGATGG ATCAGTTCTT CGCCGCCGTC AGGCTGGCAA CGGCCACAGC GCCGGTTTCA
GGGAGTGTAC AGTGA
 
Protein sequence
MKPDVKICGL KTEEAVEKAV SLGATHVGFI FFEKSPRHIE PDIAGRIAEK ARGRAKIVAV 
TVDADTDDLD DIVYLLKPDI LQLHGHESPQ QVLTIKALYG LPVMKVFSIR EPADLLQIDA
YIGIADRFLL DAKAPEGSDL PGGNGVTFDW RLLRDLDAEV DYMLSGGLNK DNVGQALAET
AARGLDVSSG VESAPGVKDL ERMDQFFAAV RLATATAPVS GSVQ