Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0014 |
Symbol | |
ID | 7389017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 10715 |
End bp | 11311 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643649761 |
Product | nitroreductase family protein |
Protein accession | YP_002547985 |
Protein GI | 222147028 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGCA GCAATCATCG TAACGCCACC CATGACATTC ACCCGATCTT CCTGGATCGC TGGTCGCCCC GCGCCTTCAC CGGCGAGACC ATGAGCAAAA CCGAATTGCT GACCATTCTT GAAGCGGCTC ATTGGGCGCC CTCGGCTTTT AACTACCAGC CTTGGCGCTT CGTCTATGCC TTGAAGGGCG ATGAACATTT CGATGCCCTG CTGGGTGCCC TGATCGAATT CAACCAAGGC TGGGCCAAGA ATGCCTCCGC TCTGGTTTTC GTCATTTCCG ATACGCTGAG CCGCTCGCCC GACGGCTCCG CGCCGAAGCC TTCGCGCAGC CACAGCTTCG ATGCCGGTGC TGCCTGGGGT TATCTGGCAC TTCAGGCTAT CCATTCCGGC TTCCATGCCC ATGGCATGAC CGGCGTAGAT TTCGATAAGG CTGCCAACGT GCTTGGTGTT CCCGCCGATT TCCATATTGA AGCCGCCGTC GCCATTGGCA AGCTGGGGGA CAAATCGATC CTGCCGGAAG GCTTGCAGGC AAAGGAAGTC CCCAATGACC GCAAACCACT GGAATCCGTG GTTTTTGAGG GTAAATTCAA GGCCTGA
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Protein sequence | MTSSNHRNAT HDIHPIFLDR WSPRAFTGET MSKTELLTIL EAAHWAPSAF NYQPWRFVYA LKGDEHFDAL LGALIEFNQG WAKNASALVF VISDTLSRSP DGSAPKPSRS HSFDAGAAWG YLALQAIHSG FHAHGMTGVD FDKAANVLGV PADFHIEAAV AIGKLGDKSI LPEGLQAKEV PNDRKPLESV VFEGKFKA
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