Gene Avi_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0014 
Symbol 
ID7389017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp10715 
End bp11311 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content57% 
IMG OID643649761 
Productnitroreductase family protein 
Protein accessionYP_002547985 
Protein GI222147028 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCA GCAATCATCG TAACGCCACC CATGACATTC ACCCGATCTT CCTGGATCGC 
TGGTCGCCCC GCGCCTTCAC CGGCGAGACC ATGAGCAAAA CCGAATTGCT GACCATTCTT
GAAGCGGCTC ATTGGGCGCC CTCGGCTTTT AACTACCAGC CTTGGCGCTT CGTCTATGCC
TTGAAGGGCG ATGAACATTT CGATGCCCTG CTGGGTGCCC TGATCGAATT CAACCAAGGC
TGGGCCAAGA ATGCCTCCGC TCTGGTTTTC GTCATTTCCG ATACGCTGAG CCGCTCGCCC
GACGGCTCCG CGCCGAAGCC TTCGCGCAGC CACAGCTTCG ATGCCGGTGC TGCCTGGGGT
TATCTGGCAC TTCAGGCTAT CCATTCCGGC TTCCATGCCC ATGGCATGAC CGGCGTAGAT
TTCGATAAGG CTGCCAACGT GCTTGGTGTT CCCGCCGATT TCCATATTGA AGCCGCCGTC
GCCATTGGCA AGCTGGGGGA CAAATCGATC CTGCCGGAAG GCTTGCAGGC AAAGGAAGTC
CCCAATGACC GCAAACCACT GGAATCCGTG GTTTTTGAGG GTAAATTCAA GGCCTGA
 
Protein sequence
MTSSNHRNAT HDIHPIFLDR WSPRAFTGET MSKTELLTIL EAAHWAPSAF NYQPWRFVYA 
LKGDEHFDAL LGALIEFNQG WAKNASALVF VISDTLSRSP DGSAPKPSRS HSFDAGAAWG
YLALQAIHSG FHAHGMTGVD FDKAANVLGV PADFHIEAAV AIGKLGDKSI LPEGLQAKEV
PNDRKPLESV VFEGKFKA