Gene Avi_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0012 
Symbol 
ID7389015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp7598 
End bp7993 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content60% 
IMG OID643649759 
Producttranscriptional regulator 
Protein accessionYP_002547983 
Protein GI222147026 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.388282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCCT TCGGCGATGC GGTGCGCGGG CTTCGGGAGC GCAAGGGAGT GAGCCAGAAG 
GACATGGCCA AGGCGATTGG TGTGACACCG GCCTATCTGT CGGCGCTCGA ACACGGACGG
CGCGGCAAGC CGAGTTTCGA CCTCTTGCAA CGCATCGCCG GCTATTTCAA CATCATCTGG
GATGAGGCCG ATGACCTGTT TGCAATAGCG GGCCTTTCCC ATCCTCGGGT GACGCTGGAT
ACCGCTGGTC TGCCTGCCGC CCATACTGCT TTTGCCAACC GGCTTGCAGG GATGATTCGC
ACCTTGTCGC CCGATGTGAT AGAAGATCTC AACGCACTCC TGAGCAGAAG CGAGCGGGAC
CGTCAAAACC CTGGAAATCC CGTGGAAGCC TGCTGA
 
Protein sequence
MTPFGDAVRG LRERKGVSQK DMAKAIGVTP AYLSALEHGR RGKPSFDLLQ RIAGYFNIIW 
DEADDLFAIA GLSHPRVTLD TAGLPAAHTA FANRLAGMIR TLSPDVIEDL NALLSRSERD
RQNPGNPVEA C