Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0012 |
Symbol | |
ID | 7389015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 7598 |
End bp | 7993 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643649759 |
Product | transcriptional regulator |
Protein accession | YP_002547983 |
Protein GI | 222147026 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.388282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCCT TCGGCGATGC GGTGCGCGGG CTTCGGGAGC GCAAGGGAGT GAGCCAGAAG GACATGGCCA AGGCGATTGG TGTGACACCG GCCTATCTGT CGGCGCTCGA ACACGGACGG CGCGGCAAGC CGAGTTTCGA CCTCTTGCAA CGCATCGCCG GCTATTTCAA CATCATCTGG GATGAGGCCG ATGACCTGTT TGCAATAGCG GGCCTTTCCC ATCCTCGGGT GACGCTGGAT ACCGCTGGTC TGCCTGCCGC CCATACTGCT TTTGCCAACC GGCTTGCAGG GATGATTCGC ACCTTGTCGC CCGATGTGAT AGAAGATCTC AACGCACTCC TGAGCAGAAG CGAGCGGGAC CGTCAAAACC CTGGAAATCC CGTGGAAGCC TGCTGA
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Protein sequence | MTPFGDAVRG LRERKGVSQK DMAKAIGVTP AYLSALEHGR RGKPSFDLLQ RIAGYFNIIW DEADDLFAIA GLSHPRVTLD TAGLPAAHTA FANRLAGMIR TLSPDVIEDL NALLSRSERD RQNPGNPVEA C
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