Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0011 |
Symbol | |
ID | 7389014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 7062 |
End bp | 7601 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643649758 |
Product | DNA repair protein |
Protein accession | YP_002547982 |
Protein GI | 222147025 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.27196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTGGGGCA AGGTGGCGCG CACCACCCGA CCCATGGCCG GTCGCCTGGA AGAGTTGACC GCCTTTGAAG ACGCCTTGAC GGAATTGGAA GCGTCAAAAG TGTTGGAACC CGGCCTTGCC GCCATGCGTG CCTCGCTCGA AAGTTCCGCC GCAAAGCCTG AGCCGAAGAA ACCGTCCGGC CTCCACCATC CGTTGGAGCG TCCTGTCAAG CGCAAGCTGT CGCGCGGCAA GCTCAAGCTG GAAGCCCGCA TCGACCTGCA CGGACTGTTC CAGAGTGAGG CCCACGCCAT CCTGTTGGAA TTTCTGGTGC GCGCCCATGA GCGTGGACTT CGCCACGTCT TGATCATCAC CGGCAAGGGC AGTTCGATGG GCAGCGAAGG CGCCTTGAAA CGGGCGGTGC CGCTATGGTT TTCCAAGCCG GAGTTCCGTT ACCTGATTTC TTCCCATGAG CCAGCGGCCC ATCATCACGG CGGGGAGGGC GCGCTTTATG TCCGCTTGGC GCGCCAGGGC GGAGAGCGAT TTGGCGGGGA TGGACAATGA
|
Protein sequence | MWGKVARTTR PMAGRLEELT AFEDALTELE ASKVLEPGLA AMRASLESSA AKPEPKKPSG LHHPLERPVK RKLSRGKLKL EARIDLHGLF QSEAHAILLE FLVRAHERGL RHVLIITGKG SSMGSEGALK RAVPLWFSKP EFRYLISSHE PAAHHHGGEG ALYVRLARQG GERFGGDGQ
|
| |