Gene Avi_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0009 
Symbol 
ID7389012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp5183 
End bp5881 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content58% 
IMG OID643649756 
ProductMembrane associated transporter protein 
Protein accessionYP_002547980 
Protein GI222147023 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTCTA ATGATTTTGT GACTCTCTTC TTTCTGGTGG CTGCGGTCCT GATTTTCTGG 
CAGCTGCGTA GCGTATTGGG ACGTCGCACT GGCAATGAAA AGCCACCGAA AGATCCTTTC
GCCGGACGCC CGGACGCTGC ATCTCCAGCA GCGGAAGATG CGCGGGTCGT CACTTTACCG
CGCCGTGACG AGGCCGATGG CGAGGAACGC CAGACGGCGA TCGACGCCTA TGCCCCGGCT
GGCACCCCGC TGAACCAGCA ATTGCGCCAG GTCGTAGAGG TTGATCCGAG CTTTGTGCCG
AAGGAATTCC TCAACGGTGC GCGCATGGCC TACGAAATGA TTGTCACGGC CTTTGCAGCT
GGCGACAGGA AGAGTTTGAA GGATCTGCTG TCGCGTGAGG TCTATGACGG TTTCGATGCC
GCAATCACCG AGCGCGAGCA GCGCGGCGAA GTGATGAAGT CCACTTTTGT CGGTATCGAC
AAGGCGGAAA TCACCAGTGC CGAAGTCCGG GATCAGGAAG TCCAGATCAC CGTACGGCTG
GTCAGCCAGT TGATTTCCGC CACTTATGAC AGTCAAGGCG CGGTGATCGA GGGCGACGCG
GAATCGGTTG GCGATGTCAA CGATATCTGG ACCTTTGCCC GCGACACGCG CTCACGCGAT
CCGAACTGGA AGCTGATCGC CACCGAATCC GACCAATGA
 
Protein sequence
MGSNDFVTLF FLVAAVLIFW QLRSVLGRRT GNEKPPKDPF AGRPDAASPA AEDARVVTLP 
RRDEADGEER QTAIDAYAPA GTPLNQQLRQ VVEVDPSFVP KEFLNGARMA YEMIVTAFAA
GDRKSLKDLL SREVYDGFDA AITEREQRGE VMKSTFVGID KAEITSAEVR DQEVQITVRL
VSQLISATYD SQGAVIEGDA ESVGDVNDIW TFARDTRSRD PNWKLIATES DQ