Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0008 |
Symbol | fxsA |
ID | 7389011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 4528 |
End bp | 5061 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643649755 |
Product | hypothetical protein |
Protein accession | YP_002547979 |
Protein GI | 222147022 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACTGA CCGCCCTTTT CCTGTTGCTA CTGCCTTTGA TGGAGATCGC GGGCTTTGTC CTGGTCGGGC AATGGCTGGG TGTTCTGCCC ACGCTGGCGC TGGTGATCGG CTCCAGTCTG CTCGGCCTCC TGGTGCTCCG CAGCCAGGGG ATCAGCCTCG CCCAGCGCCT GCGCCGTCCA CGTTCGGGCG ATCCGGAACG AGCCGCCAAA GGCGTCCTGA GTGGCACGGC ACAGATGTTC GGCGGACTAT TGCTGATATT GCCGGGCTTC ATCACGGATA TTCTTGGCCT GCTGCTCCTG GTGCCAATGG TGCGCTCTGC GCTTTGGAAG ATCATCAGCC CAAGACTTGT CTTCGTGCAG CGCGGCGGGC GGGGAGCTGG CTGGCAACAG CGGCCAGGCG GACCGACGTC ATCAGGTCCA GGGCCGGCAA AAGCAGAGGA CATCATCGAT CTCGATGAAA AGGACTATCA AAGGCACAAT CCCAACGGCT CCTCTCCCTG GACCCGGTTG CCAGGGGATG AGAGCAAGGG ATGA
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Protein sequence | MRLTALFLLL LPLMEIAGFV LVGQWLGVLP TLALVIGSSL LGLLVLRSQG ISLAQRLRRP RSGDPERAAK GVLSGTAQMF GGLLLILPGF ITDILGLLLL VPMVRSALWK IISPRLVFVQ RGGRGAGWQQ RPGGPTSSGP GPAKAEDIID LDEKDYQRHN PNGSSPWTRL PGDESKG
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