Gene Avi_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0008 
SymbolfxsA 
ID7389011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp4528 
End bp5061 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID643649755 
Producthypothetical protein 
Protein accessionYP_002547979 
Protein GI222147022 
COG category[R] General function prediction only 
COG ID[COG3030] Protein affecting phage T7 exclusion by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTGA CCGCCCTTTT CCTGTTGCTA CTGCCTTTGA TGGAGATCGC GGGCTTTGTC 
CTGGTCGGGC AATGGCTGGG TGTTCTGCCC ACGCTGGCGC TGGTGATCGG CTCCAGTCTG
CTCGGCCTCC TGGTGCTCCG CAGCCAGGGG ATCAGCCTCG CCCAGCGCCT GCGCCGTCCA
CGTTCGGGCG ATCCGGAACG AGCCGCCAAA GGCGTCCTGA GTGGCACGGC ACAGATGTTC
GGCGGACTAT TGCTGATATT GCCGGGCTTC ATCACGGATA TTCTTGGCCT GCTGCTCCTG
GTGCCAATGG TGCGCTCTGC GCTTTGGAAG ATCATCAGCC CAAGACTTGT CTTCGTGCAG
CGCGGCGGGC GGGGAGCTGG CTGGCAACAG CGGCCAGGCG GACCGACGTC ATCAGGTCCA
GGGCCGGCAA AAGCAGAGGA CATCATCGAT CTCGATGAAA AGGACTATCA AAGGCACAAT
CCCAACGGCT CCTCTCCCTG GACCCGGTTG CCAGGGGATG AGAGCAAGGG ATGA
 
Protein sequence
MRLTALFLLL LPLMEIAGFV LVGQWLGVLP TLALVIGSSL LGLLVLRSQG ISLAQRLRRP 
RSGDPERAAK GVLSGTAQMF GGLLLILPGF ITDILGLLLL VPMVRSALWK IISPRLVFVQ
RGGRGAGWQQ RPGGPTSSGP GPAKAEDIID LDEKDYQRHN PNGSSPWTRL PGDESKG